Evidence map›Paper›PMID 42572121›Full record

ArticleThe New phytologist2026

A cooperative regulatory module between TAGL2 and JMJC1 activates specific defense genes against root-knot nematodes in tomato.

Ting Yang, Yile Miao, Jiameng Zhao, Weiduo Jin, Tingting Ran, Tina Kyndt, Jingquan Yu, Jie Zhou

Abstract read
In one paragraph

Article in The New phytologist, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ting YangDepartment of Horticulture, Zhejiang Provincial Key Laboratory of Horticultural Crop Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou, 310058, China.ORCID https://orcid.org/0000-0001-8180-6986
Yile MiaoDepartment of Horticulture, Zhejiang Provincial Key Laboratory of Horticultural Crop Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou, 310058, China.ORCID https://orcid.org/0009-0007-6601-384X
Jiameng ZhaoDepartment of Horticulture, Zhejiang Provincial Key Laboratory of Horticultural Crop Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou, 310058, China.ORCID https://orcid.org/0009-0002-5974-6854
Weiduo JinDepartment of Horticulture, Zhejiang Provincial Key Laboratory of Horticultural Crop Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou, 310058, China.ORCID https://orcid.org/0009-0000-1423-8616
Tingting RanDepartment of Horticulture, Zhejiang Provincial Key Laboratory of Horticultural Crop Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou, 310058, China.ORCID https://orcid.org/0009-0003-9512-9092
Tina KyndtDepartment Biotechnology, Faculty of Bioscience Engineering, Ghent University, Ghent, 9000, Belgium.ORCID https://orcid.org/0000-0002-5267-5013
Jingquan YuDepartment of Horticulture, Zhejiang Provincial Key Laboratory of Horticultural Crop Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou, 310058, China.ORCID https://orcid.org/0000-0002-7626-1165
Jie ZhouDepartment of Horticulture, Zhejiang Provincial Key Laboratory of Horticultural Crop Quality Improvement, Zhejiang University, Zijingang Campus, Hangzhou, 310058, China.ORCID https://orcid.org/0000-0002-8797-7214

Funding

China Agriculture Research System of MOF and MARA CARS-23-B01Fundamental Research Funds for the Central Universities 226-2025-00066Fundamental Research Funds for the Central Universities 226-2025-00082Innovative Development of Horticulture Discipline of Zhejiang University B231220.0005-25National Natural Science Foundation of China 32472813Organized Scientific Research in Horticulture Discipline of Zhejiang University B231220.0005-26
6 · The paper itself

Abstract

Plant-parasitic nematodes (PPNs) threaten global food security. Although epigenetic modifications are crucial for plant immunity, how histone modifiers contribute to root-knot nematodes (RKNs, Meloidogyne incognita) resistance remains unclear. Here, using genetic, molecular and biochemical approaches, we investigated the epigenetic and transcriptional mechanisms underlying RKN resistance mediated by the histone demethylase (HDM) JMJC1 and the MADS-box transcription factor TAGL2 in tomato (Solanum lycopersicum). We identified JMJC1 as an RKN-induced positive defense regulator targeting H3K9me3 and H3K27me3 histone marks. JMJC1 physically interacts with TAGL2, which also positively regulates RKN resistance. Transcriptomic analysis indicated that TAGL2 regulates multiple layers of the plant defense network, transcriptionally activating representative genes from distinct pathways (including PUB10, bHLH98, CCaMK, and SAUR3), which we validated as positive regulators of RKN resistance via virus-induced gene silencing (VIGS). At the chromatin level, TAGL2 and JMJC1 co-regulate these loci, associating with localized H3K9me3 and H3K27me3 reduction. Furthermore, TAGL2 directly activates JMJC1 transcription, establishing a positive feedback loop that amplifies immune signaling. Our findings reveal a cooperative model wherein a HDM and a transcription factor coordinate at specific loci to fine-tune multiple defense layers at both epigenetic and transcriptional levels, providing insights for breeding durable nematode-resistant plants.

Indexed as

Genes, PlantPlant DiseasesPlant ProteinsPlant RootsSolanum lycopersicumTylenchoideaAnimalsDisease ResistanceGene Expression Regulation, PlantHistonesProtein BindingTranscription FactorsHistonesPlant ProteinsTranscription Factorshistone demethylaseJMJC1MADS‐box transcription factorroot‐knot nematodeTAGL2tomato

Identifiers

PMID42572121
PMCPMC13539946

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.