Evidence map›Paper›PMID 42563519›Full record

ArticlePediatric pulmonology2026

Systematic Reanalysis of Whole-Exome Sequencing in Genetically Unsolved Pediatric Primary Ciliary Dyskinesia.

Tilbe Hakçıl Öz, Tuğba Şişmanlar Eyüboğlu, Ayşe Tana Aslan, Nilgün Kula, Gülsüm Kayhan

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Article in Pediatric pulmonology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Tilbe Hakçıl ÖzDepartment of Medical Genetics, Faculty of Medicine, Gazi University, Ankara, Turkiye.ORCID https://orcid.org/0000-0002-1914-1191
Tuğba Şişmanlar EyüboğluDepartment of Pediatric Pulmonology, Faculty of Medicine, Gazi University, Ankara, Turkiye.ORCID https://orcid.org/0000-0001-7284-4999
Ayşe Tana AslanDepartment of Pediatric Pulmonology, Faculty of Medicine, Gazi University, Ankara, Turkiye.ORCID https://orcid.org/0000-0002-5360-8517
Nilgün KulaDepartment of Pediatric Pulmonology, Faculty of Medicine, Gazi University, Ankara, Turkiye.ORCID https://orcid.org/0000-0002-8037-666X
Gülsüm KayhanDepartment of Medical Genetics, Faculty of Medicine, Gazi University, Ankara, Turkiye.ORCID https://orcid.org/0000-0002-4286-243X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrimary ciliary dyskinesia (PCD) is a genetically heterogeneous disorder, and despite advances in next-generation sequencing, a substantial proportion of clinically suspected pediatric cases remain without a molecular diagnosis. This persistent diagnostic gap reflects limitations of earlier analysis pipelines and incomplete knowledge of PCD-related genes. Reanalysis of existing whole-exome sequencing (WES) data using updated resources has become a practical strategy to improve diagnostic yield in pediatric populations.

methodsWe retrospectively reanalyzed WES data from 34 Turkish pediatric patients with clinical suspicion of PCD evaluated at a tertiary center between 2019 and 2023, all of whom had previously nondiagnostic genetic results. Reanalysis incorporated updated population and disease databases, curated ciliary gene resources, phenotype-driven variant interpretation, and copy number variant (CNV) assessment.

resultsMolecular diagnoses were established in 3 of 34 patients (8.8%) through variants in known PCD genes, demonstrating the incremental value of systematic reanalysis enabled by detection of previously missed CNVs and updated literature evidence. In addition, rare variants in biologically plausible candidate genes were prioritized in 8 cases (23.5%), including genes involved in ciliary structure (RIBC1, NINL, DNAH14, SPMIP2), host defense pathways (USHBP1, CRYBG1, TRIM34), and laterality determination (WDR90).

conclusionSystematic WES reanalysis can identify missed molecular diagnoses and prioritize biologically relevant candidate genes in unresolved pediatric PCD cases, supporting future gene discovery and refinement of the genetic architecture of PCD, particularly in populations with high rates of consanguinity.

Indexed as

Ciliary Motility DisordersExome SequencingKartagener SyndromeAdolescentChildChild, PreschoolDNA Copy Number VariationsFemaleHumansInfantMaleRetrospective StudiesSecondary Data AnalysisTurkeyGenomic reanalysisprimary ciliary dyskinesiaundiagnosed caseswhole exome sequencing

Identifiers

PMID42563519
PMCPMC13448407

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.