Evidence map›Paper›PMID 42562572›Full record

ArticleGenes & development2026

Multiple quality control checkpoints safeguard small nuclear RNA biogenesis and prevent assembly of aberrant spliceosomes.

Tiantai Ma, Claire Huntington, Zhuoyi Song, Rea M Lardelli, Eric L Van Nostrand, Jens Lykke-Andersen

Abstract read
In one paragraph

Article in Genes & development, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Tiantai MaDepartment of Molecular Biology, School of Biological Sciences, University of California San Diego, La Jolla, California 92093, USA.ORCID http://orcid.org/0000-0002-7150-7808
Claire HuntingtonDepartment of Molecular Biology, School of Biological Sciences, University of California San Diego, La Jolla, California 92093, USA.
Zhuoyi SongTherapeutic Innovation Center and the Verna Marrs McLean Department of Biochemistry and Molecular Pharmacology, Baylor College of Medicine, Houston, Texas 77030, USA.
Rea M LardelliDepartment of Molecular Biology, School of Biological Sciences, University of California San Diego, La Jolla, California 92093, USA.
Eric L Van NostrandTherapeutic Innovation Center and the Verna Marrs McLean Department of Biochemistry and Molecular Pharmacology, Baylor College of Medicine, Houston, Texas 77030, USA.ORCID http://orcid.org/0000-0002-5188-0082
Jens Lykke-AndersenDepartment of Molecular Biology, School of Biological Sciences, University of California San Diego, La Jolla, California 92093, USA; jlykkeandersen@ucsd.edu.

Funding

UCSD/SDSU IRACDAK12GM068524 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TREJO, JOANN · 2003 to 2025
$24.4M
Mechanisms of human RNA turnover and quality controlR35GM118069 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LYKKE-ANDERSEN, JENS · 2016 to 2025
$5.1M
Large-scale characterization of the function of RNA regulatory elementsR35HG011909 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI VAN NOSTRAND, ERIC LYMAN · 2021 to 2025
$2.4M
Illumina NovaSeq 6000 Sequencing SystemS10OD026929 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JEPSEN, KRISTEN LYNN · 2019 to 2019
$600k
What is the molecular function of MOV10 ATPase in RNA-induced silencing of mRNA?F32GM106706 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LARDELLI, REA M · 2013 to 2014
$107k
NHGRI NIH HHS R35 HG011909NIGMS NIH HHS F32 GM106706NIGMS NIH HHS K12 GM068524NIGMS NIH HHS R35 GM118069NIH HHS S10 OD026929
6 · The paper itself

Abstract

Defective small nuclear (sn)RNAs are produced from hundreds of human snRNA pseudogenes and mutant snRNA genes associated with human developmental disorders. Machineries that prevent defective snRNAs from disrupting pre-mRNA splicing remain poorly defined. Here, we identify multiple checkpoints in snRNA biogenesis monitored by quality control machineries that subject defective snRNAs to degradation and prevent their assembly into spliceosomes. We show that variant U1 snRNAs produced from human pseudogenes, some at rates approaching canonical snRNAs, are impaired in 3' cleavage and targeted for degradation by the NEXT-exosome while failures in subsequent protein assembly steps promote NEXT-exosome- or terminal uridylyl transferase 4/7-mediated degradation. These pathways also repress mutant snRNAs associated with human developmental disorders. Impeding snRNA quality control causes formation of aberrant spliceosomes and altered pre-mRNA splicing. These findings define checkpoints in snRNA biogenesis that safeguard pre-mRNA splicing and represent potential therapeutic targets for human disorders associated with snRNA mutations.

Indexed as

Integratorneurodevelopmental disorders (NDD)NEXT-exosomepseudogenesRNA quality controlsnRNAspliceosomesplicingTUT4TUT7

Identifiers

PMID42562572
PMCPMC13573567

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.