Evidence map›Paper›PMID 42561939›Full record

ArticleStem cell reports2026

A macrophage-intestinal organoid co-culture model captures balanced epithelial homeostasis and inflammation.

Lisa Tonini, Tae Baek Lee, Eunju Jang, Sungmoo Hong, Soobin Choi, Changhwan Ahn

Abstract read
In one paragraph

Article in Stem cell reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Lisa ToniniVeterinary Physiology Laboratory, College of Veterinary Medicine, Jeju National University, Jeju 63243, Republic of Korea.
Tae Baek LeeVeterinary Physiology Laboratory, College of Veterinary Medicine, Jeju National University, Jeju 63243, Republic of Korea.
Eunju JangVeterinary Physiology Laboratory, College of Veterinary Medicine, Jeju National University, Jeju 63243, Republic of Korea.
Sungmoo HongDepartment of Veterinary Medicine and Veterinary Medical Research Institute, College of Veterinary Medicine, Jeju National University, Jeju 63243, Republic of Korea.
Soobin ChoiVeterinary Physiology Laboratory, College of Veterinary Medicine, Jeju National University, Jeju 63243, Republic of Korea.
Changhwan AhnVeterinary Physiology Laboratory, College of Veterinary Medicine, Jeju National University, Jeju 63243, Republic of Korea; Department of Veterinary Medicine and Veterinary Medical Research Institute, College of Veterinary Medicine, Jeju National University, Jeju 63243, Republic of Korea. Electronic address: cahn@jejunu.ac.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Immune-epithelial interactions are essential for intestinal homeostasis, yet organoid monocultures lack immune components and fail to model how immune cells shape epithelial identity. Here, we establish a macrophage-organoid co-culture integrating bone marrow-derived macrophages (BMDMs) into the intestinal niche to create a controlled, immune-competent system. Under homeostatic conditions, the optimized 5k configuration of BMDMs preserves crypt-like architecture and maintains stem cell localization and secretory lineage organization. TNFα stimulation induces coordinated epithelial remodeling characterized by reduced canonical stem cell marker expression and density-dependent shifts in macrophage phenotype. Transcriptomic profiling confirms enrichment of immune-associated and epithelial stress pathways. Comparative analysis with a DSS-induced murine inflammation model reveals overlapping inflammatory and epithelial remodeling features, supporting physiological relevance. This platform provides a reproducible framework for studying epithelial-immune interactions and inflammatory remodeling under defined conditions, offering a controlled alternative to animal models.

Indexed as

HomeostasisInflammationIntestinal MucosaMacrophagesOrganoidsAnimalsCoculture TechniquesEpithelial CellsMiceStem CellsBMDMco-culture modelepithelial-immune crosstalkinflammatory remodelingintestinal organoidsintestinal stem cells

Identifiers

PMID42561939
PMCPMC13555428

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.