Evidence map›Paper›PMID 42559327›Full record

ArticleISME communications2026

Unraveling fitness landscapes in plant-associated Bacteroidota.

Marta Torres, Vincent Lombard, Nicolas Terrapon, Adam M Deutschbauer

Abstract read
In one paragraph

Article in ISME communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Marta TorresEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.ORCID https://orcid.org/0000-0002-0609-9123
Vincent LombardAix Marseille University, CNRS, UMR7257, AFMB, Marseille 13288, France.ORCID https://orcid.org/0000-0002-9684-7067
Nicolas TerraponAix Marseille University, CNRS, UMR7257, AFMB, Marseille 13288, France.ORCID https://orcid.org/0000-0002-3693-6017
Adam M DeutschbauerEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, United States.ORCID https://orcid.org/0000-0003-2728-7622

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Members of the bacterial phylum Bacteroidota inhabit diverse ecosystems, yet environmental species remain poorly understood compared to clinically relevant ones. Although Bacteroidota are dominant in crop-associated microbiomes, the mechanisms enabling them to thrive in plant and soil environments remain unclear. A key obstacle in understanding gene fitness in Bacteroidota is the lack of genome-wide functional studies, largely due to their inherent resistance to antibiotics, which hinders genetic manipulation. Here, we applied randomly barcoded transposon mutagenesis sequencing (RB-TnSeq) to measure gene fitness in a plant-associated Bacteroidota,

Indexed as

BacteroidetesBrachypodium distachyoncarbohydrate-active enzymes (CAZymes)Mucilaginibacterpolysaccharide utilization loci (PULs)randomly barcoded transposon sequencing (RB-TnSeq)rhizosphere

Identifiers

PMID42559327
PMCPMC13440311

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.