Evidence map›Paper›PMID 42557621›Full record

ArticleTransboundary and emerging diseases2026

Extended-Spectrum Beta-Lactamase (ESBL)-Producing E. coli in Livestock and Free-Roaming Wildlife: A Combined Phenotyping-Whole-Genome Sequencing One Health Approach.

Sheena Conforti, Adamandia Kapopoulou, Claudia Bank, Belinda Köchle, Bahtiyar Yilmaz, Jens Becker

Abstract read
In one paragraph

Article in Transboundary and emerging diseases, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sheena ConfortiEawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf 8600, Switzerland.ORCID https://orcid.org/0000-0002-0173-6170
Adamandia KapopoulouInstitute of Ecology and Evolution, University of Bern, Bern 3012, Switzerland, unibe.ch.ORCID https://orcid.org/0000-0003-4192-4923
Claudia BankInstitute of Ecology and Evolution, University of Bern, Bern 3012, Switzerland, unibe.ch.ORCID https://orcid.org/0000-0003-4730-758X
Belinda KöchleClinic for Ruminants, Vetsuisse-Faculty, University of Bern, Bern 3012, Switzerland, unibe.ch.ORCID https://orcid.org/0009-0005-0068-9076
Bahtiyar YilmazDepartment of Visceral Surgery and Medicine, Bern University Hospital, University of Bern, Bern 3010, Switzerland, unibe.ch.ORCID https://orcid.org/0000-0003-1888-9226
Jens BeckerClinic for Ruminants, Vetsuisse-Faculty, University of Bern, Bern 3012, Switzerland, unibe.ch.ORCID https://orcid.org/0000-0002-2594-007X

Funding

Consortium of Swiss Academic LibrariesNovartis Foundation for medical-biological Research 22A018Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung 192763Universität Bern
6 · The paper itself

Abstract

Antimicrobial resistance (AMR) in Enterobacterales, particularly extended-spectrum beta-lactamase-producing Escherichia coli (ESBL-Ec), poses a significant public health concern. Widespread antimicrobial use exerts selection pressure, driving the persistence and spread of resistant bacteria in diverse environments. While ESBL-Ec is well-documented in clinical and agricultural settings, its presence in animal reservoirs remains poorly understood. This study assessed the prevalence, AMR profiles, and genetic diversity of ESBL-Ec in Swiss dairy cattle and wildlife. Between 2021 and 2023, 775 samples were analyzed, including rectal swab samples from dairy cows (n = 475) and fecal or cloacal swab samples from wildlife (n = 300). ESBL-Ec was detected in 3/475 (0.6%, 95% confidence interval [CI] 0.2%-1.8%) of dairy cattle and 15/300 (5%, 95% CI 3.1%-8.1%) wildlife samples, with higher prevalence in birds (6/99, 6.1%, 95% CI 2.8%-12.6%) than mammals (9/200, 4.5%, 95% CI 2.4%-8.3%). Whole-genome sequencing (WGS) of 54 ESBL-Ec isolates identified 28 sequence types (STs) with no overlap between livestock and wildlife, suggesting distinct evolutionary trajectories. Phenotypic testing revealed resistance beyond beta-lactams, notably against aminoglycosides, tetracyclines, and sulfonamides, whereas all isolates remained susceptible to tigecycline and meropenem. Multidrug resistance (MDR) was prevalent (89%), with bla

Indexed as

Animals, Wildbeta-LactamasesEscherichia coliEscherichia coli InfectionsLivestockAnimalsAnti-Bacterial AgentsCattlePhenotypePrevalenceSwitzerlandWhole Genome SequencingAnti-Bacterial Agentsbeta-Lactamasesantimicrobialsenvironmentresistanceselection pressure

Identifiers

PMID42557621
PMCPMC13442921

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.