Evidence map›Paper›PMID 42548924›Full record

ArticleComputational and structural biotechnology journal2026

SARS-CoV-2 NSP8-Derived Peptide Effectively Suppresses the Activity of Helicase NSP13.

Shina Pashova, Peicho Petkov, Rositsa Hristova, Elena Krachmarova, Genoveva Nacheva, Anastas Gospodinov, Elena Lilkova, Nevena Ilieva, Miroslav Rangelov, Nadezhda Todorova and 2 more

Abstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Shina PashovaInstitute of Biology and Immunology of Reproduction "Acad. K. Bratanov", Bulgarian Academy of Sciences, Sofia 1113, Bulgaria.ORCID https://orcid.org/0000-0001-9857-2872
Peicho PetkovSofia University "St. Kl. Ohridsky", Physics Faculty, Sofia 1164, Bulgaria.ORCID https://orcid.org/0000-0002-0420-9480
Rositsa HristovaInstitute of Molecular Biology "Acad. Roumen Tsanev", Bulgarian Academy of Sciences, Sofia 1113, Bulgaria.ORCID https://orcid.org/0000-0001-8362-5396
Elena KrachmarovaInstitute of Molecular Biology "Acad. Roumen Tsanev", Bulgarian Academy of Sciences, Sofia 1113, Bulgaria.ORCID https://orcid.org/0000-0002-9501-0724
Genoveva NachevaInstitute of Molecular Biology "Acad. Roumen Tsanev", Bulgarian Academy of Sciences, Sofia 1113, Bulgaria.ORCID https://orcid.org/0000-0001-5663-8589
Anastas GospodinovInstitute of Molecular Biology "Acad. Roumen Tsanev", Bulgarian Academy of Sciences, Sofia 1113, Bulgaria.ORCID https://orcid.org/0000-0001-6216-9563
Elena LilkovaInstitute of Information and Communication Technologies, Bulgarian Academy of Sciences, Sofia 1113, Bulgaria.ORCID https://orcid.org/0000-0003-2008-710X
Nevena IlievaInstitute of Information and Communication Technologies, Bulgarian Academy of Sciences, Sofia 1113, Bulgaria.ORCID https://orcid.org/0000-0002-2372-2319
Miroslav RangelovInstitute of Organic Chemistry with Centre of Phytochemistry, Bulgarian Academy of Sciences, Sofia 1113, Bulgaria.ORCID https://orcid.org/0000-0002-7953-7593
Nadezhda TodorovaInstitute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, Sofia 1113, Bulgaria.ORCID https://orcid.org/0000-0002-7195-195X
Anastas Pashov"Stephan Angeloff" Institute of Microbiology, Bulgarian Academy of Sciences, Sofia 1113, Bulgaria.ORCID https://orcid.org/0000-0002-6033-3566
Leandar LitovSofia University "St. Kl. Ohridsky", Physics Faculty, Sofia 1164, Bulgaria.ORCID https://orcid.org/0000-0002-8511-6883

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) nonstructural protein 13 (NSP13) is a multifunctional helicase that plays a central role in viral RNA replication and suppression of host innate immunity. Beyond its essential function within the replication-transcription complex (RTC), NSP13 antagonizes type I interferon (IFN-I) signaling through interaction with the host kinase TBK1, making its protein-protein interactions attractive antiviral targets. In this study, we investigated whether fragments derived from the viral cofactor NSP8 can competitively interfere with NSP13 interactions. Using molecular dynamics simulations, interaction mapping, and neural network-based binding free energy prediction, we characterized NSP13 interfaces with (a) full-length NSP8 in 2 RTC binding modes, (b) N- and C-terminal NSP8 fragments, and (c) TBK1. Structural analyses revealed that the N-terminal fragment of NSP8 (NSP8-N, residues 1 to 87) binds NSP13 with high affinity and occupies residues critical for both TBK1 association and canonical NSP8-NSP13 interactions, including Met

Identifiers

PMID42548924
PMCPMC13429913

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.