Evidence map›Paper›PMID 42540239›Full record

ArticleACS omega2026

Metadynamics Simulations Meet Ligand Design for the Reversible Inhibition of Human Peroxiredoxin 5.

Laura Troussicot, Florian E C Blanc, Yoann Pascal, Sebastien Vidal, Jean-Marc Lancelin, Florence Guillière

Abstract read
In one paragraph

Article in ACS omega, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Laura TroussicotInstitut des Sciences Analytiques, Université Lyon 1, CNRS, UMR 5280, Lyon 69100, France.ORCID https://orcid.org/0000-0001-8297-8886
Florian E C BlancInstitut des Sciences Analytiques, Université Lyon 1, CNRS, UMR 5280, Lyon 69100, France.ORCID https://orcid.org/0000-0002-0762-0478
Yoann PascalInstitut de Chimie et Biochimie Moléculaires et Supramoléculaires, UMR 5246, CNRS, Université Claude Bernard Lyon 1, Université de Lyon, INSA Lyon, CPE Lyon, Villeurbanne 69622, France.
Sebastien VidalInstitut de Chimie et Biochimie Moléculaires et Supramoléculaires, UMR 5246, CNRS, Université Claude Bernard Lyon 1, Université de Lyon, INSA Lyon, CPE Lyon, Villeurbanne 69622, France.ORCID https://orcid.org/0000-0001-7812-698X
Jean-Marc LancelinInstitut des Sciences Analytiques, Université Lyon 1, CNRS, UMR 5280, Lyon 69100, France.
Florence GuillièreInstitut des Sciences Analytiques, Université Lyon 1, CNRS, UMR 5280, Lyon 69100, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Using insights from funnel metadynamics, a molecular dynamics protocol that provides a detailed representation of protein-ligand interactions, we investigated how a single heavy-atom modification can enhance the activity of an initial hit against human peroxiredoxin 5. This improvement was validated by NMR experiments and enzyme-inhibition assays. Our results illustrate how molecular dynamics simulations offer a rational framework for designing ligands with improved properties, starting from low affinity but selective hits with minimal structural modifications.

Identifiers

PMID42540239
PMCPMC13425361

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.