Evidence map›Paper›PMID 42533117›Full record

ArticleGenetica2026

Identification and characterization of a testis-specific glycogen phosphorylase in Kumamoto oyster Crassostrea sikamea.

Yun-Wang Shen, Zhuo-Wen Geng, Jia-Lu Yu

Abstract read
PubMed Publisher
In one paragraph

Article in Genetica, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Yun-Wang ShenNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, 316022, China. shenyw@zjou.edu.cn.
Zhuo-Wen GengNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, 316022, China.
Jia-Lu YuNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, 316022, China.

Funding

Open Fund of National Engineering Research Center for Marine Aquaculture NERC202411
6 · The paper itself

Abstract

Glycogen serves as the principal energy source for gonadal development in marine bivalves, such as oysters. Glycogen phosphorylase is the rate-limiting enzyme of glycogenolysis by catalyzing the first step of glycogen breakdown. In this study, two different glycogen phosphorylase genes were identified in the Kumamoto oyster (Crassostrea sikamea) genome, including the previously reported GPH and an unknown PYG. C. sikamea GPH and PYG share high mRNA and protein sequence identities, but they have distinct gene structures and show significant sequence variations in their adenine loops. Interestingly, contrary to the ubiquitous expression of GPH in various adult tissues and development stages, PYG is specifically expressed in oyster male gonads. Transcriptome and quantitative real-time PCR (qRT-PCR) analyses reveal differential expression levels of other glycogen metabolism enzymes between female and male gonads, including glycogen phosphorylase (GPH), glycogen debranching enzyme (AGL), glycogen synthase (GYS), and glycogen branching enzyme (GBE). Yeast one-hybrid assays suggest the sex-determining gene DMRT1 could directly bind to oyster PYG promoters. Further investigations demonstrate GPH and PYG are two conserved glycogen phosphorylases in bivalve genomes. The bivalve PYG seems to originate from the retroposition of GPH, making it the first retrogene identified in molluscs, to the best of our knowledge. In conclusion, these results characterized the second and testis-specific glycogen phosphorylase in the oyster.

Indexed as

CrassostreaGlycogen PhosphorylaseTestisAmino Acid SequenceAnimalsFemaleMalePhylogenyGlycogen PhosphorylaseGlycogen metabolismGlycogenolysisGlycogen phosphorylaseOysterTestis-specific expression

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.