Evidence map›Paper›PMID 42532992›Full record

ArticleScientific data2026

Chromosome-level genome assemblies of Brownlowia tersa and Brownlowia argentata (Brownlowioideae: Malvaceae).

Panthita Ruang-Areerate, Duangjai Sangsrakru, Poompat Phadphon, Chutima Sonthirod, Chaiwat Naktang, Wasitthee Kongkachana, Nukoon Jomchai, Tamanai Pravinvongvuthi, Sumet Thongdon-Um, Poonsri Wanthongchai and 2 more

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In one paragraph

Article in Scientific data, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Panthita Ruang-AreerateBIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, 12120, Thailand.ORCID http://orcid.org/0000-0003-3864-1404
Duangjai SangsrakruBIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, 12120, Thailand.
Poompat PhadphonBIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, 12120, Thailand.
Chutima SonthirodBIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, 12120, Thailand.
Chaiwat NaktangBIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, 12120, Thailand.ORCID http://orcid.org/0000-0003-1400-8508
Wasitthee KongkachanaBIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, 12120, Thailand.
Nukoon JomchaiBIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, 12120, Thailand.
Tamanai PravinvongvuthiDepartment of Marine and Coastal Resources, 120 The Government Complex, Chaengwatthana Rd., Thung Song Hong, Bangkok, 10210, Thailand.
Sumet Thongdon-UmDepartment of Marine and Coastal Resources, 120 The Government Complex, Chaengwatthana Rd., Thung Song Hong, Bangkok, 10210, Thailand.
Poonsri WanthongchaiDepartment of Marine and Coastal Resources, 120 The Government Complex, Chaengwatthana Rd., Thung Song Hong, Bangkok, 10210, Thailand.
Sithichoke TangphatsornruangBIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, 12120, Thailand.
Wirulda PootakhamBIOTEC, National Science and Technology Development Agency (NSTDA), Pathum Thani, 12120, Thailand. wirulda@alumni.stanford.edu.

Funding

National Science and Technology Development Agency (NSTDA) P2351537
6 · The paper itself

Abstract

Although Brownlowia tersa and Brownlowia argentata are classified as near-threatened and data-deficient mangrove species, respectively, their genomic resources remain limited. Here, we present chromosome-level genome assemblies for both species and a SNP data for B. tersa in Thailand. The assembled genomes of B. tersa and B. argentata are 392.91 Mb and 395.11 Mb in size, with scaffold N50 values of 25.70 Mb and 26.03 Mb, respectively. Both genomes showed approximately 98% complete BUSCOs and LAI scores of 10. Approximately 96% of each assembly was anchored to 14 pseudochromosomes. Repetitive elements comprised approximately 45% of both genomes, including 25% unclassified repeats. A total of 31,864 and 28,920 protein-coding genes were predicted in B. tersa and B. argentata, respectively, of which approximately 88% were functionally annotated and 90% were complete BUSCOs. Additionally, 1,196 and 1,222 ncRNAs were identified in B. tersa and B. argentata, respectively. SNP data from 37 B. tersa accessions were also generated. These genome assemblies and the SNP dataset provide valuable resources for studying mangrove evolution and conservation.

Indexed as

Chromosomes, PlantGenome, PlantMalvaceaePolymorphism, Single NucleotideThailand

Identifiers

PMID42532992
PMCPMC13424676

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.