Evidence map›Paper›PMID 42530398›Full record

ArticleEnvironmental microbiology2026

Cell-Surface and Periplasmic Deconstruction of Xylan by Oligotrophic Bacterium Caulobacter vibrioides.

Viet Bui, Rhoda E Inkoom, Hansini K Gamage Don, Britto P Nathan, Gopal R Periyannan

Abstract read
In one paragraph

Article in Environmental microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Viet BuiDepartment of Chemistry and Biochemistry, Eastern Illinois University, Charleston, Illinois, USA.
Rhoda E InkoomDepartment of Chemistry and Biochemistry, Eastern Illinois University, Charleston, Illinois, USA.ORCID https://orcid.org/0009-0002-3672-6359
Hansini K Gamage DonDepartment of Biological Sciences, Eastern Illinois University, Charleston, Illinois, USA.
Britto P NathanDepartment of Biological Sciences, Eastern Illinois University, Charleston, Illinois, USA.ORCID https://orcid.org/0000-0002-1968-4954
Gopal R PeriyannanDepartment of Chemistry and Biochemistry, Eastern Illinois University, Charleston, Illinois, USA.ORCID https://orcid.org/0000-0001-7654-1629

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bacterial species that inhabit diverse nutritional niches, such as plants, the human gut, and aquatic environments, exhibit common and unique molecular mechanisms for acquiring nutrients from plant polysaccharides like xylan. The oligotrophic bacterium Caulobacter vibrioides (Syn. Caulobacter crescentus) shows unique adaptations for growth in low-nutrient conditions and codes for a repertoire of genes that facilitate xylan utilisation as a carbon source. Investigation of xylan and xylan-derivative utilisation by C. vibrioides shows membrane-bound xylanase-mediated xylan deconstruction on the cell surface and further deconstruction of the xylo-oligosaccharides in the periplasm by xylosidases and other accessory enzymes. Proton motive force disruption studies suggest involvement of TonB-dependent transporters, Major Facilitator Superfamily transporters, or ATP-Binding Cassette transporters in the transport of xylo-oligosaccharides and other xylan-derivatives across the membranes of C. vibrioides. Results from our studies using enzyme assays and chromatographic analyses suggest that bacteria deconstruct xylan in a surface-bound manner leading to efficient uptake of xylo-oligosaccharides across the outer membrane, without loss of nutrients to the environment. This proposed model for C. vibrioides xylan utilisation highlights both unique and similar mechanistic features found in gut and plant pathogenic bacteria, advancing the molecular understanding of nutrient acquisition in oligotrophic Gram-negative bacteria.

Indexed as

CaulobacterPeriplasmXylansBacterial ProteinsCaulobacter crescentusCell MembraneXylosidasesBacterial ProteinsXylansXylosidasesCaulobacter vibrioidesdegradationglycoside hydrolasepolysaccharideXylanxylanase

Identifiers

PMID42530398
PMCPMC13422128

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.