Evidence map›Paper›PMID 42529453›Full record

ArticlePsychoradiology2026

Effect of database, pre-processing pipeline, and scan duration on rs-fMRI functional connectivity based treatment targets for TMS obtained using the Stanford Neuromodulation Therapy (SNT) protocol.

Lian Yu, Xue Li, Neil Roberts, Xiaoqi Huang, Haoyang Xing

Abstract read
In one paragraph

Article in Psychoradiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Lian YuMedical Imaging Laboratory, College of Physics, Sichuan University, No. 24 South Section 1, Yihuan Road, Wuhou District, Chengdu, Sichuan Province, 610065, China.
Xue LiMedical Imaging Laboratory, College of Physics, Sichuan University, No. 24 South Section 1, Yihuan Road, Wuhou District, Chengdu, Sichuan Province, 610065, China.
Neil RobertsCentre for Reproductive Health (CRH), Institute for Regeneration and Repair (IRR), University of Edinburgh, 4-5 Little France Drive, Edinburgh BioQuarter, Edinburgh, EH16 4UU, United Kingdom.ORCID https://orcid.org/0000-0001-5538-8653
Xiaoqi HuangHuaxi MR Research Center (HMRRC), Department of Radiology, West China Hospital of Sichuan University, No. 37 Guoxue Lane, Wuhou District, Chengdu, Sichuan Province, 610041, China.ORCID https://orcid.org/0000-0001-8686-5010
Haoyang XingMedical Imaging Laboratory, College of Physics, Sichuan University, No. 24 South Section 1, Yihuan Road, Wuhou District, Chengdu, Sichuan Province, 610065, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Transcranial Magnetic Stimulation targeting the dorsolateral prefrontal cortex (DLPFC) is a therapeutic approach for treating depressive disorder. However, traditional anatomical methods often fail to localize a treatment target. The functional connectivity method represented by the Stanford Neuromodulation Therapy (SNT) has been proposed and demonstrated efficacy. A step of SNT is to achieve DLPFC target localization using resting-state functional magnetic resonance imaging (rs-fMRI) data, based on measurement of the negative correlation coefficient between the functional connectivity of DLPFC and the subgenual anterior cingulate cortex (sgACC). Methods: This study has three goals. Firstly, to apply the SNT protocol to investigate variability in target localization in four groups (Human Connectome Project [HCP], China Human Connectome Project [CHCP], major depressive disorder [MDD] from Huaxi Depression Imaging Cohort Study [HX-DICS], and healthy controls [HC] from HX-DICS) from three databases. Secondly, to investigate potential differences in how the DPABI and FSL rs-fMRI pre-processing pipelines, particularly the spatial smoothing, denoising, and temporal filtering steps, affect the localization of individualized DLPFC targets. Thirdly, to assess the effect of rs-fMRI scan duration (ranging from 6 to 30 min) on target localization. Results: Significant inter-subject variability in DLPFC coordinates was found, emphasizing the necessity of individualized targeting. DPABI and FSL pre-processing produced significant differences in target coordinates, which exceeded 1 cm, with mean Euclidean distances ranging from 1.45 to 3.82 cm across cohorts, and individual maximum deviations reaching 6.14 cm. FSL pipeline consistently produced higher negative correlation coefficients than DPABI. Scan duration analysis indicated that after 12 min, the stability of individual target positions no longer improved significantly with prolonged scanning time, suggesting that approximately 12 min may provide sufficiently reliable data for target computation. Conclusion: Taken together, findings demonstrate that advancing precision neuromodulation therapy requires optimized data acquisition, standardized workflows, software-specific validation, and optimum scan duration.

Indexed as

major depressive disorder (MDD)personalized treatment targetpre-processing pipelinescan durationStanford Neuromodulation Therapy (SNT)transcranial magnetic stimulation (TMS)

Identifiers

PMID42529453
PMCPMC13418188

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.