Evidence map›Paper›PMID 42527047›Full record

ArticlePhysiologia plantarum

Elucidating the Growth-Promoting Mechanism of Bacillus safensis in Nipponbare Rice Through Integrated Phenotypic and Transcriptome Analysis.

Luobing Han, Zichang Jia, Shaolong Jiang, Ziyu Zhang, Qingyi Zhang, Li Wang, Xinyue Liang, Feitong Liu, Hanyi Wu, Yinggao Liu and 3 more

Abstract read
In one paragraph

Article in Physiologia plantarum. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Luobing HanState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.
Zichang JiaState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.ORCID https://orcid.org/0000-0003-3749-7201
Shaolong JiangState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.
Ziyu ZhangState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.ORCID https://orcid.org/0009-0003-5080-6117
Qingyi ZhangState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.
Li WangState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.
Xinyue LiangState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.
Feitong LiuState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.
Hanyi WuState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.
Yinggao LiuState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.ORCID https://orcid.org/0009-0006-0101-4174
Xuanxuan HouState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.
Xue YangState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.
Yuan TianState Key Laboratory of Crop Biology, College of Life Science, Shandong Agricultural University, Tai'an, China.ORCID https://orcid.org/0009-0006-9182-9560

Funding

National Natural Science Foundation of China NSFC32272132
6 · The paper itself

Abstract

A growing global demand for rice necessitates improvements in grain productivity to support sustainable agricultural developments. Bacillus safensis, a halophilic soil bacterium, has been shown to enhance crop growth, but its effects on rice (Oryza sativa L.) remain unclear. In this study, we tested how B. safensis affects rice yields and agronomic traits. We applied B. safensis to roots and panicles of rice and measured plant height, tiller number, panicle length, panicle weight, grain number per panicle, 1000-grain weight, grain setting rate and theoretical yield. The results showed that root treatment and root-panicle co-treatment increased theoretical yield by 4.33% and 2.78%, respectively, accompanied by significant improvements in plant height, tiller number, panicle length, and grain number per panicle. RNA-seq analysis revealed shifts in gene expression and alternative splicing associated with these agronomic improvements. KEGG pathway analysis showed B. safensis treatment regulated genes involved in stress tolerance, metabolic regulation, and secondary metabolite production. Field experiments further demonstrated that B. safensis application significantly increased tiller number, grain number per panicle, 1000-grain weight and grain setting rate, leading to an 8.98% increase in theoretical yield. Overall, this study suggests B. safensis is a promising biostimulant for sustainable rice farming and provides a reference for the application of B. safensis in rice production.

Indexed as

BacillusOryzaGene Expression ProfilingGene Expression Regulation, PlantPhenotypePlant RootsTranscriptomeBacillus safensisKEGG pathwayOryza sativa L. ssp. japonicaplant growth‐promoting bacteriarice yieldtranscriptome

Identifiers

PMID42527047
PMCPMC13420961

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.