Evidence map›Paper›PMID 42523824›Full record

ArticleComputational and structural biotechnology journal2026

Theta-Defensin Proteins: Conformational Variability and Environmental Effects.

Nicolas Vatiliotis, Finn van Loon, Doğa Selin Damar, Maria Fyta

Abstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nicolas VatiliotisComputational Biotechnology, RWTH Aachen University, 52074 Aachen, Germany.ORCID https://orcid.org/0009-0003-7527-2350
Finn van LoonComputational Biotechnology, RWTH Aachen University, 52074 Aachen, Germany.ORCID https://orcid.org/0009-0009-3905-1925
Doğa Selin DamarComputational Biotechnology, RWTH Aachen University, 52074 Aachen, Germany.ORCID https://orcid.org/0009-0009-7201-0607
Maria FytaComputational Biotechnology, RWTH Aachen University, 52074 Aachen, Germany.ORCID https://orcid.org/0000-0002-5425-7907

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Theta-defensins are a unique class of cyclic antimicrobial peptides known for their exceptional structural stability and broad-spectrum antimicrobial activity. Despite their therapeutic potential in mammals, the effects of solvent environments and specific mutations on their conformational stability remain poorly understood. This paper employs all-atom molecular dynamics simulations under different solvent conditions to investigate the structural dynamics of baboon theta-defensin-2 (BTD-2) peptides, as well as solvent effects. BTD-2 was selected due to its higher arginine content, enhancing its antimicrobial potency compared to that of the rhesus theta-defensin-1 protein. We compare the dynamics of 3 different BTD-2 conformations and assess their flexibility, residual fluctuations, and thermal stability. Although similar in sequence, these peptides provide conformation-specific temporal characteristics. The insights gained through the analysis of the simulation data contribute to a deeper understanding of theta-defensin stability, providing important information related to the rational design of peptide-based antimicrobial and antiviral therapeutics.

Identifiers

PMID42523824
PMCPMC13408038

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.