Evidence map›Paper›PMID 42518714›Full record

ArticleESMO real world data and digital oncology2026

Assessing clinical decision support system tools in precision oncology: piloting ring testing.

V Nygaard, S Zhao, D Tamborero, R Rosenquist, A Stenzinger, P Roepman, J Lehtiö, C W Yde, K Rekker, C Brodin and 13 more

Abstract read
In one paragraph

Article in ESMO real world data and digital oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

V NygaardDepartment of Pathology, Division of Laboratory Medicine, Oslo University Hospital, Oslo, Norway.
S ZhaoDepartment of Pathology, Division of Laboratory Medicine, Oslo University Hospital, Oslo, Norway.
D TamboreroDepartment of Oncology-Pathology, Karolinska Institutet, Science for Life Laboratory, Stockholm, Sweden.
R RosenquistDepartment of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
A StenzingerInstitute for Pathology, Heidelberg University Hospital, Heidelberg, Germany.
P RoepmanHartwig Medical Foundation, Amsterdam, the Netherlands.
J LehtiöDepartment of Oncology-Pathology, Karolinska Institutet, Science for Life Laboratory, Stockholm, Sweden.
C W YdeCenter for Genomic Medicine, Rigshospitalet, Copenhagen, Denmark.
K RekkerDepartment of Laboratory Genetics, Genetics and Personalized Medicine Clinic, Tartu University Hospital, Tartu, Estonia.
C BrodinCentre de Recherche en Cancérologie de Lyon (CRCL), Centre Léon Bérard, Lyon, France.
L VerlingueCentre de Recherche en Cancérologie de Lyon (CRCL), Centre Léon Bérard, Lyon, France.
D BordinDepartment of Clinical Molecular Biology, Akershus University Hospital, Unit for Precision Medicine, Lørenskog, Norway.
J KlajicDepartment of Clinical Molecular Biology, Akershus University Hospital, Unit for Precision Medicine, Lørenskog, Norway.
S F Haj MohammadDepartment of Medical Oncology, Leiden University Medical Centre, Leiden, the Netherlands.
L Silwal-PanditDepartment of Pathology, Division of Laboratory Medicine, Oslo University Hospital, Oslo, Norway.
A NilsenDepartment of Pathology, Division of Laboratory Medicine, Oslo University Hospital, Oslo, Norway.
M R TeixeiraDepartment of Laboratory Genetics, Portuguese Institute of Oncology of Porto (IPO-Porto), Porto, Portugal.
A PeixotoDepartment of Laboratory Genetics, Portuguese Institute of Oncology of Porto (IPO-Porto), Porto, Portugal.
S NakkenDepartment of Tumor Biology, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.
E HovigDepartment of Tumor Biology, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.
A EdsjöDepartment of Clinical Genetics, Pathology and Molecular Diagnostics, Skåne University Hospital, Lund, Sweden.
H G RussnesDepartment of Pathology, Division of Laboratory Medicine, Oslo University Hospital, Oslo, Norway.
PCM4EU Consortium

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: The EU4Health project PCM4EU aimed to improve survival rates and quality of life of patients with cancer based on precision cancer medicine. To achieve this, enhanced expertise and quality of molecular cancer diagnostics are key. Clinical decision support systems (CDSS) have become increasingly important after the introduction of comprehensive genomic diagnostic profiling. While external quality assessment schemes are mandatory for most diagnostic laboratory tests, similar programs for CDSS tools are currently lacking. To address this, we piloted an international ring test documenting CDSS usage, performance, and manual interpretation. Materials and methods: Twenty synthetic datasets were generated, mimicking small variant call sets from a typical targeted 500-gene panel (VCF format) across multiple cancer types (10 tumour-normal pairs and 10 tumour-only). Participants received standardised instructions via e-mail and at a virtual meeting and submitted results using a structured response form. Results: Eight laboratories from seven countries participated. All participants submitted results for the 10 tumour-only cases; one submitted results from two assessors. Tumour-only cases contained 6-18 variants where interpretation could be critical. Oncogenic calls for hotspot variants showed good agreement across the various CDSS tools applied; however, variability existed regarding reported variants and clinical interpretation. Conclusion: The pilot ring test revealed clinically relevant discrepancies between laboratories and interpreters, underscoring the need for structured external quality assessment schemes for CDSS tools in addition to the existing laboratory workflow schemes. It also highlighted several challenges related to the generation of realistic synthetic data, the design of reporting formats, the definition of ground truth, and the manual interpretation of results.

Indexed as

clinical decision supportcomprehensive genomic analysesmolecular pathologyprecision oncologyquality assessmentsring test

Identifiers

PMID42518714
PMCPMC13382446

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.