Evidence map›Paper›PMID 42513932›Full record

ArticleMicroorganisms2026

Evaluation of an AI-Assisted Colony Counting System Across Multiple Culture Media Using Standardized Pure Culture Plates.

Xue Li, Meng Xiao, Dingding Li, Meihui Liu, Yingchun Xu

Abstract read
In one paragraph

Article in Microorganisms, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xue LiDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100730, China.
Meng XiaoDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100730, China.ORCID 0000-0003-2103-7008
Dingding LiDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100730, China.
Meihui LiuDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100730, China.
Yingchun XuDepartment of Laboratory Medicine, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100730, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Automated AI-assisted colony counting may improve standardization in digital microbiology, but performance can be affected by colony density, culture medium, colony morphology, adhesion, and plate artifacts. We evaluated the Starry-300 AI colony counting system using 382 standardized pure culture bacterial and yeast plates across four agar media. AI-assisted counts were compared with a three-reader median ImageJ-assisted manual comparator derived from independent counts by experienced technologists. The AI workflow showed close agreement with the manual consensus comparator across a broad colony density range. Overall, 360/382 plates (94.24%) were within ±10 CFU and 377/382 plates (98.69%) were within ±30 CFU of the manual median count. Error-based and agreement analyses showed a mean absolute error of 3.19 CFU/plate; both the intraclass correlation coefficient and Lin's concordance correlation coefficient were0.99. AI software analysis required approximately 5-15 s/plate, although this did not include plate handling, correction, or reporting. These findings support the analytical feasibility of reviewable AI-assisted colony enumeration under controlled pure culture conditions. Further validation using primary clinical specimens, mixed cultures, near-threshold samples, and external sites is required before broad clinical implementation.

Indexed as

artificial intelligenceautomated image analysisclinical microbiologycolony countingculture media

Identifiers

PMID42513932
PMCPMC13413662

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.