Cell-Type Deconvolution of Equine BALF RNA-Seq: A Critical Comparison with Matched Single-Cell Data.

Vidhya Jagannathan, Tosso Leeb, Vinzenz Gerber, Sophie E Sage

Abstract readComparative Study

In one paragraph

Article in Genes, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it

0cells of the map it votes in

0citing papers in PubMed

–field-weighted citation impact

1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Vidhya JagannathanInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3012 Bern, Switzerland.ORCID 0000-0002-8155-0041

Tosso LeebInstitute of Genetics, Vetsuisse Faculty, University of Bern, 3012 Bern, Switzerland.ORCID 0000-0003-0553-4880

Vinzenz GerberSwiss Institute of Equine Medicine, Department of Clinical Veterinary Medicine, Vetsuisse Faculty, University of Bern, 3012 Bern, Switzerland.

Sophie E SageSwiss Institute of Equine Medicine, Department of Clinical Veterinary Medicine, Vetsuisse Faculty, University of Bern, 3012 Bern, Switzerland.ORCID 0000-0002-6945-070X

Funding

Internal Research Fund of the Swiss Institute of Equine Medicine 33-890Swiss National Science Foundation 31003A- 162548/1

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

AsthmaBronchoalveolar Lavage FluidHorse DiseasesRNA-SeqSingle-Cell AnalysisAnimalsGene Expression ProfilingHorsesRNA, MessengerSequence Analysis, RNASingle-Cell Gene Expression AnalysisRNA, Messengerbronchoalveolar lavage fluidbulk RNA sequencingcomputational deconvolutionequine asthmasingle-cell RNA sequencing

Identifiers

PMID42510813

DOI10.3390/genes17070773

PMCPMC13408615

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.