Evidence map›Paper›PMID 42506713›Full record

ReviewToxins2026

SELEX-Based Aptamer Technologies for Toxin Analysis: Screening, Optimization, and Computational Assisted Design.

Xinrui Shang, Chengming Yang, Huiyun Deng, Lianghua Wang, Mingjuan Sun

Abstract readReview
In one paragraph

Review in Toxins, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xinrui ShangDepartment of Student Team, College of Basic Medical Sciences, Naval Medical University, Shanghai 200433, China.
Chengming YangDepartment of Student Team, College of Basic Medical Sciences, Naval Medical University, Shanghai 200433, China.ORCID 0009-0006-4279-0241
Huiyun DengDepartment of Student Team, College of Basic Medical Sciences, Naval Medical University, Shanghai 200433, China.ORCID 0009-0006-9384-1256
Lianghua WangDepartment of Biochemistry and Molecular Biology, College of Basic Medical Sciences, Naval Medical University, Shanghai 200433, China.
Mingjuan SunDepartment of Biochemistry and Molecular Biology, College of Basic Medical Sciences, Naval Medical University, Shanghai 200433, China.ORCID 0009-0004-9185-4024

Funding

National Natural Science Foundation of China No. 42576136The Basic Medical Research Incubation Program of Naval Medical University No. 2024MS001The Postgraduate Supervisor Training Program of Naval Medical University No. 2025-HS17
6 · The paper itself

Abstract

The accurate and sensitive detection of toxin contamination remains a pressing challenge for food safety, environmental integrity, and public health, because conventional analytical methods suffer from high costs, poor field stability, and inadequate sensitivity for trace-level emerging contaminants. In this review, we provide a comprehensive overview of biosensor technologies for toxin detection, with a dedicated focus on nucleic acid aptamers and SELEX (Systematic Evolution of Ligands by Exponential Enrichment) technology. We systematically categorize nine SELEX variants developed for toxin detection, covering target-immobilized, library-immobilized, non-immobilized, cell-based, and high-throughput platforms, with an emphasis on their selection principles, applicability, and limitations. This review discusses computationally assisted aptamer discovery (e.g., AI-based sequence generation and molecular docking) as well as experimental post-SELEX optimization strategies such as cyclization, multivalent assembly, and structure-switching design. We then discuss key challenges and future perspectives, highlighting the shift from method-oriented to demand-oriented aptamer development through integrated SELEX strategies and AI-assisted design. Overall, this review covers mainstream SELEX technologies, aptamer selection, computational design, experimental optimization, and sensor integration to serve as a reference for next-generation toxin detection applications.

Indexed as

Bacterial ToxinsSELEX Aptamer TechniqueAnimalsArtificial IntelligenceBiosensing TechniquesHumansBacterial Toxinsaptamer optimizationaptasensorbiosensorcomputational designnucleic acid aptamerSELEX technologytoxin detection

Identifiers

PMID42506713
PMCPMC13431319

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.