Evidence map›Paper›PMID 42505138›Full record

ArticlemSystems2026

Microbiota assembly in

Gina Chaput, Emma A Deen, Eric Q Pham, Sarah Crystal, Andrew Matayoshi, Peter Andeer, Trent R Northen, Jonathan A Eisen, John J Stachowicz, E Maggie Sogin

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in mSystems, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Gina ChaputGenome Center, University of California Davis, Davis, California, USA.ORCID 0000-0001-5612-5687
Emma A DeenDepartment of Evolution and Ecology, University of California Davis, Davis, California, USA.
Eric Q PhamDepartment of Evolution and Ecology, University of California Davis, Davis, California, USA.
Sarah CrystalDepartment of Evolution and Ecology, University of California Davis, Davis, California, USA.
Andrew MatayoshiDepartment of Evolution and Ecology, University of California Davis, Davis, California, USA.
Peter AndeerEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
Trent R NorthenEnvironmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, USA.ORCID 0000-0001-8404-3259
Jonathan A EisenGenome Center, University of California Davis, Davis, California, USA.
John J StachowiczDepartment of Evolution and Ecology, University of California Davis, Davis, California, USA.
E Maggie SoginDepartment of Molecular Cell Biology, University of California Merced, Merced, California, USA.ORCID 0000-0001-7533-3705

Funding

Gordon and Betty Moore Foundation Marine Model Systems #9359Joint Genome Institute CSP New Investigator Proposal 509268National Science Foundation NSF BioOce #2311577
6 · The paper itself

Abstract

Seagrass restoration practices are evolving to leverage microbiome applications, similar to agricultural systems that have demonstrated how targeted microbial communities enhance crop resilience in challenging environments. While adult seagrass microbiome research has expanded significantly, research on the seed microbiome remains critically understudied. This gap is important given that seeds represent a large portion of restoration efforts. Advancing seed microbiome research requires standardized experimental systems for controlled plant-microbe interaction studies, which are currently lacking in seagrass research. Here, we tested fabricated ecosystem devices (EcoFAB 2.0) as a standardized system for growing

Indexed as

MicrobiotaZosteraceaeBacteriaHost Microbial InteractionsRNA, Ribosomal, 16SSeedlingsSeedsRNA, Ribosomal, 16Smicrobial ecologymicrobiomeplant–microbe interactions

Identifiers

PMID42505138
PMCPMC13483243

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.