Evidence map›Paper›PMID 42504016›Full record

ArticleFEBS open bio2026

Protocol for quantifying miRNA trafficking across the endosomal membrane.

Syamantak Ghosh, Kamalika Mukherjee, Suvendra N Bhattacharyya

Abstract read
In one paragraph

Article in FEBS open bio, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Syamantak GhoshRNA Biology Research Laboratory, Molecular Genetics Division, CSIR-Indian Institute of Chemical Biology, Kolkata, India.ORCID https://orcid.org/0009-0001-0013-9382
Kamalika MukherjeeDepartment of Anesthesiology, University of Nebraska Medical Center, Omaha, NE, USA.ORCID https://orcid.org/0000-0001-6520-4846
Suvendra N BhattacharyyaDepartment of Pharmacology and Experimental Neuroscience, University of Nebraska Medical Center, Omaha, NE, USA.ORCID https://orcid.org/0000-0001-9697-3824

Funding

College of Medicine, University of Nebraska Medical Center
6 · The paper itself

Abstract

The import of miRNA across the endosomal membrane is an essential prerequisite for the loading of miRNAs into the endosomal lumen. These miRNAs are then incorporated into mature multivesicular bodies (MVBs), which then fuse with the plasma membrane, leading to the release of exosomes or extracellular vesicles carrying miRNAs into the intercellular space. Here, we present a reproducible in vitro assay for the quantification of miRNA import across the endosomal membrane. We detail the isolation of intact endosomes from mammalian cells, followed by the loading of synthetic, chemically modified microRNAs (miRNAs) into the vesicles in an RNase-resistant form. Integrating differential centrifugation and iodixanol density-gradient fractionation, we isolate endosomes free of endoplasmic reticulum contamination. Then, we use optimized in vitro cargo-loading techniques to facilitate subsequent assessment of miRNA uptake, stability, and delivery efficiency in the presence of altered external factors, such as ATP or substrate concentration. Ultimately, this protocol presents a standardized method for quantifying miRNA trafficking across the endosomal membrane.

Indexed as

differential centrifugationendosomesin vitro miRNA loading assayiodixanol density gradientmiRNA

Identifiers

PMID42504016
PMCPMC13402843

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.