Evidence map›Paper›PMID 42503771›Full record

ArticleEnvironmental science & technology2026

Pathogen Forecast Model Version 1.0: A Process-based Five-Day Beach Advisory Forecast System for the San Diego/Tijuana Region.

Falk Feddersen, M S Spydell, Akanksha Gupta, Sarah N Giddings, Amaia Ruiz de Alegría Arzaburu, Ian Brunjes, Corey Olfe, Clarissa Anderson, Andrew D Barton, James Behrens and 8 more

Abstract read
In one paragraph

Article in Environmental science & technology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Falk FeddersenScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.ORCID 0000-0002-5488-9074
M S SpydellScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.
Akanksha GuptaScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.
Sarah N GiddingsScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.
Amaia Ruiz de Alegría ArzaburuInstituto de Investigaciones Oceanológicas, Universidad Autónoma de Baja California, 22860Ensenada, Mexico.
Ian BrunjesScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.
Corey OlfeScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.
Clarissa AndersonScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.
Andrew D BartonScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.
James BehrensCalifornia Data Buoy Systems, San Diego, California92107, United States.
Katherine BermanBaylor College of Medicine , Houston, Texas77030, United States.
Jeff BowmanScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.ORCID 0000-0002-8811-6280
Bruce D CornuelleScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.
Ganesh GopalakrishnanScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.
Shelby Marhoefer-JessSouthern California Coastal Water Research Project , Costa Mesa, California92626, United States.
Uwe SendScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.
Matthias LankhorstScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.ORCID 0000-0002-4166-4044
Nathali Cordero QuirosScripps Institution of Oceanography, University of California San Diego, La Jolla, California92093, United States.

Funding

San Diego State Delegation NAState of California NAState Senator Steve Padilla NA
6 · The paper itself

Abstract

The San Diego/Tijuana (US/Mexico) coastal region has immense water quality issues due to untreated wastewater sources. Regular ddPCR Enterococcus sampling provides same-day water quality information for beachgoers but does not provide forecasts for decision making. We describe the Pathogen Forecast Model (PFM) V1.0, providing daily 5 day forecasts of swimmer illness risk along 30 km of shoreline on a web dashboard. PFM is based upon a hydrodynamic model using forecasted waves, winds, offshore currents, and Tijuana River flow as inputs. PFM accurately forecasts tides and waves and forecasts depth-averaged shelf currents moderately well. Modeled untreated wastewater concentration tracer C evolves with a constant decay rate representing Norovirus. Over 13 km of shoreline, forecasted C and observed EnterococcusE are moderately log-correlated (≈0.5) for day-1 and -5 forecasts. The C and E power-law relationship has an exponent of ≈0.5, possibly suggesting the tracer decays 2× slower than Enterococcus DNA, among other potential explanations. Using the cutoff C = 10-5, PFM classified advisory exceedances with nearly 80% raw accuracy, high sensitivity, and lower specificity. This is the first forecast model that resolves estuarine, surfzone, and shelf regions. PFM is a useful public health tool and is constantly being improved.

Indexed as

ForecastingWater QualityBathing BeachesCaliforniaEnterococcusMexicoModels, TheoreticalWastewaterWastewaterEnterococcusestuaryforecastedforecastsmodelqualityshelfsurf zoneswimmer illnesstracertransportuntreatedwastewaterwater

Identifiers

PMID42503771
PMCPMC13472152

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.