Evidence map›Paper›PMID 42502702›Full record

ArticleConvergent science physical oncology2017

Multiplexed single cell protein expression analysis in solid tumours using a miniaturised microfluidic assay.

Alastair J Magness, James A Squires, Beatrice Griffiths, Khurum Khan, Amanda Swain, Keith R Willison, David Cunningham, Marco Gerlinger, David R Klug

Abstract read
In one paragraph

Article in Convergent science physical oncology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. The Human Protein Atlas-Spatial localization of the human proteome in health and disease.Protein science : a publication of the Protein Society · 2021
    Article
  4. Review
  5. Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Alastair J MagnessInstitute of Chemical Biology, Imperial College London, London SW7 2AZ, United Kingdom.
James A SquiresInstitute of Chemical Biology, Imperial College London, London SW7 2AZ, United Kingdom.
Beatrice GriffithsCentre for Evolution and Cancer, The Institute for Cancer Research, 237 Fulham Road, London SW3 6JB, United Kingdom.
Khurum KhanThe Royal Marsden Hospital NHS Foundation Trust, Fulham Road, London SW3 6JJ, United Kingdom.
Amanda SwainTumour Profiling Unit, The Institute of Cancer Research, 237 Fulham Road, London SW3 6JB, United Kingdom.
Keith R WillisonInstitute of Chemical Biology, Imperial College London, London SW7 2AZ, United Kingdom.
David CunninghamThe Royal Marsden Hospital NHS Foundation Trust, Fulham Road, London SW3 6JJ, United Kingdom.
Marco GerlingerCentre for Evolution and Cancer, The Institute for Cancer Research, 237 Fulham Road, London SW3 6JB, United Kingdom.
David R KlugInstitute of Chemical Biology, Imperial College London, London SW7 2AZ, United Kingdom.

Funding

Wellcome Trust
6 · The paper itself

Abstract

Using patient-derived colorectal cancer xenografts, we demonstrate a practicable workflow for single cell proteomics in clinically relevant samples and thus a potential translational route for single cell proteomics into medical diagnostics. Using a microfluidic antibody capture (MAC) chip we measured the expression of the tumour suppressor protein p53 and of its post-translationally modified form phosphorylated at serine-15. Aberrant expression of these has commonly been found in colorectal cancers and has been widely investigated for prognostic significance. Our results show that the MAC technology is viable for quantitatively assessing protein expression and phosphorylation at the single cell level in microscopic amounts of clinically relevant tumour material. Thus, this could become a useful tool in therapeutic-associated single cell protein analysis. We also found dramatic variability of p53 and phosphorylated p53 quantities between individual cancer cells from the same sample, demonstrating the power of this single cell technology to study functional intratumour heterogeneity.

Indexed as

colorectal cancermicrofluidicsprotein quantificationsingle cell analysistranslational proteomicstumor heterogeneityxenograft

Identifiers

PMID42502702
PMCPMC13401346

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.