Evidence map›Paper›PMID 42498881›Full record

ArticleNature methods2026

Bridging complexity and accessibility in metabolomics with MetaboApps.

Helena Mannochio-Russo, Wilhan D Gonçalves Nunes, Haoqi Nina Zhao, Kine Eide Kvitne, Shipei Xing, Harsha Gouda, Julius Agongo, Ipsita Mohanty, Vincent Charron-Lamoureux, Prajit Rajkumar and 12 more

Abstract readLetter
PubMed Publisher
In one paragraph

Article in Nature methods, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Pan-Metabolomics Repository Mapping of the Carnitine Landscape.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. A Functional Metabolomics Framework to Track Microbiome Drug Metabolism.bioRxiv : the preprint server for biology · 2026
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Helena Mannochio-Russo *Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Wilhan D Gonçalves Nunes *Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-0609-6678
Haoqi Nina ZhaoSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-3908-630X
Kine Eide KvitneSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-8118-7660
Shipei XingSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Harsha GoudaSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-4511-5875
Julius AgongoSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Ipsita MohantySkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Vincent Charron-LamoureuxSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-9440-7036
Prajit RajkumarSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0009-0002-5538-5270
Abzer K Pakkir ShahFunctional Metabolomics Lab, CMFI Cluster of Excellence, University of Tübingen, Tübingen, Germany.
Axel WalterFunctional Metabolomics Lab, CMFI Cluster of Excellence, University of Tübingen, Tübingen, Germany.
Rithi KrishnarajDepartment of Computer Science and Engineering, University of California, Riverside, Riverside, CA, USA.
Yasin El AbieadSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Patrick C FerreiraInstitute of Chemistry, University of Campinas, Campinas, Brazil.
Simone ZuffaSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-7237-3402
Abubaker PatanSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Andrés Mauricio Caraballo-RodríguezSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA.
Wout BittremieuxDepartment of Computer Science, University of Antwerp, Antwerpen, Belgium.ORCID http://orcid.org/0000-0002-3105-1359
Daniel PetrasFunctional Metabolomics Lab, CMFI Cluster of Excellence, University of Tübingen, Tübingen, Germany.ORCID http://orcid.org/0000-0002-6561-3022
Mingxun WangDepartment of Computer Science and Engineering, University of California, Riverside, Riverside, CA, USA. mingxun.wang@cs.ucr.edu.ORCID http://orcid.org/0000-0001-7647-6097
Pieter C DorresteinSkaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA. pdorrestein@health.ucsd.edu.ORCID http://orcid.org/0000-0002-3003-1030

Funding

Collaborative Microbial Metabolite CenterU24DK133658 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PIETER C DORRESTEIN · 2022 to 2026
$2.9M
Deutsche Forschungsgemeinschaft (German Research Foundation) EXC 2124Fonds Wetenschappelijk Onderzoek (Research Foundation Flanders) G0AGQ24NFonds Wetenschappelijk Onderzoek (Research Foundation Flanders) G0AHY25NGordon and Betty Moore Foundation (Gordon E. and Betty I. Moore Foundation) GBMF12120Simons Foundation SFI-LS-ECIAMEE-00013858U.S. Department of Health & Human Services | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (National Institute of Diabetes & Digestive & Kidney Diseases) U24DK133658
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Identifiers

PMID42498881

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.