Evidence map›Paper›PMID 42493535›Full record

ArticleScientific reports2026

Quantitative correlation of spectroscopic signatures with ligand-protein interactions in anti-cancer drug Afinitor: an integrated experimental-computational study.

P Venkata Ramana, Rashmirekha Ram, Prasadarao Bobbili, Y Rama Krishna, Rabinarayan Panda, Shouri Dominic, Pratap Kumar Dakua, Siddharth Kumar

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Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

P Venkata RamanaDepartment of Engineering Physics, AUCE (A), Andhra University, Visakhapatnam, 530003, India. venkatphotonics@gmail.com.
Rashmirekha RamDepartment of CSE, Koneru Lakshmaiah Education Foundation, Green Fields, Vaddeswaram, Andhra Pradesh, 522302, India.
Prasadarao BobbiliDepartment of Electronics and Communication Engineering, Vignan's Institute of Information Technology (A), Visakhapatnam, 530049, India.
Y Rama KrishnaDepartment of Engineering Physics, AUCE (A), Andhra University, Visakhapatnam, 530003, India.
Rabinarayan PandaDepartment of CSE, Garden City University, Bengaluru, India.
Shouri DominicDepartment of Basic Sciences and Humanities, Vignan's Institute of Engineering for Women (Autonomous), Kapujaggarajupeta, Andhra Pradesh, 530049, India.
Pratap Kumar DakuaDepartment of Electronics & Communication Engineering, Koneru Lakshmaiah Education Foundation, Green Fields, Vaddeswaram, Andhra Pradesh, 522502, India.
Siddharth KumarDepartment of Artificial Intelligence and Machine Learning, Manipal University Jaipur, Jaipur, Rajasthan, India. siddharth.kumar@jaipur.manipal.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A detailed molecular-level understanding of anticancer drugs is essential for improving therapeutic efficacy and guiding rational drug design. Everolimus (Afinitor), a clinically important inhibitor of the mammalian target of rapamycin (mTOR) pathway, is widely used in cancer therapy; however, a quantitatively grounded relationship between its spectroscopic characteristics and ligand-protein interactions remains insufficiently explored. In this study, an integrated experimental-computational approach was employed, combining FT-IR spectroscopy, UV-Vis spectroscopy, and molecular docking simulations. Spectroscopic analyses were used to characterise functional groups and electronic structure, while docking simulations were performed to investigate interactions with FK506 binding protein (FKBP12) and the FKBP-rapamycin binding (FRB) domain. FT-IR analysis revealed a high density of oxygen-containing functional groups, including hydroxyl and carbonyl moieties, with vibrational frequencies indicative of a strongly polarised electronic environment. Molecular docking demonstrated favourable binding affinities with FKBP12 (- 9.7 and - 9.6 kcal·mol⁻

Indexed as

Antineoplastic AgentsEverolimusTacrolimus Binding Protein 1AHumansLigandsMolecular Docking SimulationProtein BindingSpectrophotometry, UltravioletSpectroscopy, Fourier Transform InfraredTOR Serine-Threonine KinasesAntineoplastic AgentsEverolimusLigandsTacrolimus Binding Protein 1ATOR Serine-Threonine KinasesAfinitorFKBP-Rapamycin binding domainFT-IR and UV–VisImmunosuppressant FK506Molecular docking

Identifiers

PMID42493535
PMCPMC13396367

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.