Evidence map›Paper›PMID 42492511›Full record

ArticleStem cell reports2026

The imprinted Peg3 gene is a potent regulator of the DNA methylome in trophoblast cells.

Caroline Kokorudz, Noura Ballasy, Bethany N Radford, Anshul S Jadli, Alexa Krala, Ankita Narang, Wendy Dean, Myriam Hemberger

Abstract read
In one paragraph

Article in Stem cell reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Caroline KokorudzDepartment of Biochemistry and Molecular Biology, Cumming School of Medicine, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada; Alberta Children's Hospital Research Institute, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada.
Noura BallasyDepartment of Biochemistry and Molecular Biology, Cumming School of Medicine, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada; Alberta Children's Hospital Research Institute, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada.
Bethany N RadfordDepartment of Biochemistry and Molecular Biology, Cumming School of Medicine, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada; Alberta Children's Hospital Research Institute, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada.
Anshul S JadliDepartment of Biochemistry and Molecular Biology, Cumming School of Medicine, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada; Alberta Children's Hospital Research Institute, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada.
Alexa KralaDepartment of Biochemistry and Molecular Biology, Cumming School of Medicine, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada; Alberta Children's Hospital Research Institute, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada.
Ankita NarangAlberta Children's Hospital Research Institute, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada.
Wendy DeanAlberta Children's Hospital Research Institute, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada; Department of Cell Biology and Anatomy, Cumming School of Medicine, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada.
Myriam HembergerDepartment of Biochemistry and Molecular Biology, Cumming School of Medicine, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada; Alberta Children's Hospital Research Institute, University of Calgary, 3330 Hospital Drive NW, Calgary, AB T2N 4N1, Canada. Electronic address: myriam.hemberger@ucalgary.ca.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Paternally expressed gene 3 (Peg3) is an imprinted gene whose knockout (KO) causes placental and fetal growth deficits as well as maternal behavioral defects, but its molecular role remains poorly understood. Here, we report that Peg3-null trophoblast stem cells (TSCs) exhibit increased rates of mitotic errors and double-strand DNA breaks as a likely consequence of a global reduction in H3K9me3 and DNA methylation levels. Transcriptional profiling highlights a deficiency of KO cells to adequately silence genes, resulting in elevated expression levels of differentiation stage-inappropriate genes. Peg3 KO TSCs also exhibit a loss of DNA methylation and H3K9me3 at a subset of developmentally regulated CpG islands that likely rewire CTCF-regulated transcriptional networks. Collectively, our data identify PEG3 as an intrinsic component of the epigenetic repressive machinery, thus solidifying its putative role as a KRAB-ZFP protein that functions to regulate gene expression and genome integrity in the placental trophoblast lineage.

Indexed as

DNA MethylationGenomic ImprintingKruppel-Like Transcription FactorsTrophoblastsAnimalsCCCTC-Binding FactorCell DifferentiationCpG IslandsFemaleGene Expression Regulation, DevelopmentalGene Knockout TechniquesHistonesMiceStem CellsCCCTC-Binding FactorHistonesKruppel-Like Transcription FactorsPeg3 protein, mouseCRISPR-Cas9 knockoutDNA methylationDNA repairepigenetic repressionimprinted genesKRAB-ZFPstrophoblast stem cells

Identifiers

PMID42492511
PMCPMC13476889

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.