Evidence map›Paper›PMID 42491347›Full record

ArticleiMeta2026

Integrative host-microbiome modeling uncovers the implication of oral-gut translocation in advanced cirrhosis.

Yi Jin, Frederick Clasen, Fernando Garcia-Guevara, Sania Arif, Robert Schierwagen, Gholamreza Bidkhori, Michael Praktiknjo, Maximilian J Brol, Frank E Uschner, Florence A Castelli and 12 more

Abstract readLetter
In one paragraph

Article in iMeta, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Yi JinCentre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King's College London London UK.
Frederick ClasenCentre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King's College London London UK.
Fernando Garcia-GuevaraCentre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King's College London London UK.
Sania ArifDepartment of Internal Medicine B University of Münster Münster Germany.
Robert SchierwagenDepartment of Internal Medicine B University of Münster Münster Germany.
Gholamreza BidkhoriCentre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King's College London London UK.
Michael PraktiknjoDepartment of Internal Medicine B University of Münster Münster Germany.
Maximilian J BrolDepartment of Internal Medicine B University of Münster Münster Germany.
Frank E UschnerDepartment of Internal Medicine B University of Münster Münster Germany.
Florence A CastelliCEA, INRAE, Département Médicaments et Technologies pour la Santé (MTS), MetaboHUB-IDF Université Paris-Saclay Gif-sur-Yvette France.
Nicolas PonsUniversité Paris-Saclay, INRAE, MGP Jouy-en-Josas France.
Benoit QuinquisUniversité Paris-Saclay, INRAE, MGP Jouy-en-Josas France.
Nathalie GalleronUniversité Paris-Saclay, INRAE, MGP Jouy-en-Josas France.
Kevin Da SilvaUniversité Paris-Saclay, INRAE, MGP Jouy-en-Josas France.
Christophe JunotCEA, INRAE, Département Médicaments et Technologies pour la Santé (MTS), MetaboHUB-IDF Université Paris-Saclay Gif-sur-Yvette France.
Debbie L ShawcrossRoger Williams Institute of Liver Studies, School of Immunology and Microbial Sciences, Faculty of Life Sciences and Medicine, King's College London London UK.
David L MoyesCentre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King's College London London UK.
Rajiv JalanLiver Failure Group, UCL Institute for Liver and Digestive Health London UK.
S Dusko EhrlichDepartment of Clinical and Movement Neurosciences UCL Queen Square Institute of Neurology, University College London London UK.
Vishal C PatelRoger Williams Institute of Liver Studies, School of Immunology and Microbial Sciences, Faculty of Life Sciences and Medicine, King's College London London UK.
Jonel TrebickaDepartment of Internal Medicine B University of Münster Münster Germany.
Saeed ShoaieCentre for Host-Microbiome Interactions, Faculty of Dentistry, Oral & Craniofacial Sciences, King's College London London UK.ORCID https://orcid.org/0000-0001-5834-4533

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Liver cirrhosis is associated with profound disruption of host-microbiome metabolic interactions. Using paired oral and fecal metagenomics combined with genome-scale metabolic modeling, we investigated how microbial translocation along the oral-gut axis influences microbial metabolism at different cirrhosis severities. Reactobiome-based functional profiling revealed progressive metabolic convergence between oral and gut microbiomes, quantified by a decrease in oral-gut metabolic distance. Translocation-associated microbial species enriched in patients with cirrhosis were predicted to have elevated capacities for ammonia and acetate production. Microbial-community and host metabolic modeling further suggested that these microbial metabolic shifts may influence host energy metabolism and redox balance across the liver, brain, and skeletal muscle. Together, these findings suggest a potential acetate-ammonia metabolic axis linking oral-gut microbial translocation with systemic metabolic stress in advanced cirrhosis.

Identifiers

PMID42491347
PMCPMC13377410

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.