Evidence map›Paper›PMID 42490494›Full record

ArticleScience (New York, N.Y.)2026

Dose-dependent sensitivity of human three-dimensional chromatin to a heart disease-linked transcription factor.

Zoe L Grant, Shuzhen Kuang, Shu Zhang, Abraham J Horrillo, Zhe Chen, Kavitha S Rao, Cemre Celen, Vasumathi Kameswaran, Carine Joubran, Pik Ki Lau and 9 more

Abstract read
In one paragraph

Article in Science (New York, N.Y.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. Chromatin topology control by a muscle-specific ribosomal protein.bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. Enhancer Dynamics for Gene Regulation in the Cardiovascular System.Arteriosclerosis, thrombosis, and vascular biology · 2026
    Review
  7. Article
  8. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors.

Zoe L Grant *Gladstone Institutes, San Francisco, CA, USA.ORCID 0000-0003-0580-5222
Shuzhen Kuang *Gladstone Institutes, San Francisco, CA, USA.ORCID 0009-0008-3844-3647
Shu ZhangGladstone Institutes, San Francisco, CA, USA.ORCID 0009-0005-6592-118X
Abraham J HorrilloGladstone Institutes, San Francisco, CA, USA.ORCID 0000-0001-6334-7229
Zhe ChenGladstone Institutes, San Francisco, CA, USA.ORCID 0009-0004-6605-8237
Kavitha S RaoGladstone Institutes, San Francisco, CA, USA.ORCID 0000-0001-5401-6989
Cemre CelenGladstone Institutes, San Francisco, CA, USA.ORCID 0000-0001-8308-3750
Vasumathi KameswaranGladstone Institutes, San Francisco, CA, USA.ORCID 0000-0003-2552-6183
Carine JoubranGladstone Institutes, San Francisco, CA, USA.ORCID 0000-0002-8747-6954
Pik Ki LauDepartment of Cellular and Molecular Medicine, University of California, San Diego, School of Medicine, La Jolla, CA, USA.
Keyi DongDepartment of Cellular and Molecular Medicine, University of California, San Diego, School of Medicine, La Jolla, CA, USA.ORCID 0009-0009-8662-4706
Bing YangDepartment of Cellular and Molecular Medicine, University of California, San Diego, School of Medicine, La Jolla, CA, USA.ORCID 0009-0004-8590-5358
Weronika M BartosikDepartment of Cellular and Molecular Medicine, University of California, San Diego, School of Medicine, La Jolla, CA, USA.ORCID 0009-0007-7724-5216
Nathan R ZemkeDepartment of Cellular and Molecular Medicine, University of California, San Diego, School of Medicine, La Jolla, CA, USA.ORCID 0000-0002-6326-5925
Bing RenDepartment of Cellular and Molecular Medicine, University of California, San Diego, School of Medicine, La Jolla, CA, USA.ORCID 0000-0002-5435-1127
Deepak SrivastavaGladstone Institutes, San Francisco, CA, USA.ORCID 0000-0002-3480-5953
Irfan S KathiriyaDepartment of Anesthesia and Perioperative Care, University of California, San Francisco, CA, USA.ORCID 0000-0003-1207-1490
Katherine S Pollard *Gladstone Institutes, San Francisco, CA, USA.ORCID 0000-0002-9870-6196
Benoit G Bruneau *Gladstone Institutes, San Francisco, CA, USA.ORCID 0000-0002-0804-7597

Funding

Center for Integrated Multi-modal and Multi-scale Nucleome ResearchUM1HG011585 · NHGRI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DULAC, CATHERINE, LEIN, ED · 2020 to 2024
$6.7M
Genetic determinants of 4D genome folding in human cardiac developmentU01HL157989 · NHLBI · J. DAVID GLADSTONE INSTITUTES · PI BRUNEAU, BENOIT GAETAN, POLLARD, KATHERINE S. · 2020 to 2024
$3.8M
Gene regulatory networks for heart developmentR01HL155906 · NHLBI · J. DAVID GLADSTONE INSTITUTES · PI BRUNEAU, BENOIT GAETAN · 2021 to 2024
$2.4M
Illumina NovaSeq 6000 Sequencing SystemS10OD028511 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHOW, ERIC D · 2020 to 2020
$583k
BD FACSAria II Flow CytometerS10RR028962 · NCRR · J. DAVID GLADSTONE INSTITUTES · PI CAVROIS, MARIELLE · 2011 to 2011
$544k
NCRR NIH HHS S10 RR028962NHGRI NIH HHS UM1 HG011585NHLBI NIH HHS R01 HL155906NHLBI NIH HHS U01 HL157989NIH HHS S10 OD028511
6 · The paper itself

Abstract

Dosage-sensitive transcription factors (TFs) underlie altered gene regulation in human developmental disorders, and cell type-specific gene regulation is linked to the reorganization of three-dimensional (3D) chromatin during cellular differentiation. In this work, we show dose-dependent regulation of chromatin organization by the congenital heart disease (CHD)-linked, lineage-restricted TF TBX5 in human cardiomyocyte differentiation. Genome organization, including compartments, topologically associated domains, and chromatin loops, was sensitive to reduced

Indexed as

ChromatinGene DosageHeart Defects, CongenitalMyocytes, CardiacT-Box Domain ProteinsCell Cycle ProteinsCell DifferentiationChromosomal Proteins, Non-HistoneCohesinsEnhancer Elements, GeneticGene Expression RegulationHumansCell Cycle ProteinsChromatinChromosomal Proteins, Non-HistoneCohesinsT-Box Domain ProteinsT-box transcription factor 5

Identifiers

PMID42490494
PMCPMC13452302

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.