Evidence map›Paper›PMID 42490377›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2026

Sentinel plants enable quantitative monitoring of bioavailable nitrate in soils and microbial environments.

Eugene Li, Chiara Berruto, Tufan M Oz, Elisa Grillo, Catherine Griffin, Yunqing Wang, Kimberley T Muchenje, Jolie W Jones, Gozde S Demirer

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Eugene LiChemistry and Chemical Engineering Division, California Institute of Technology, Pasadena, CA 91125.
Chiara BerrutoBiology and Biological Engineering Division, California Institute of Technology, Pasadena, CA 91125.ORCID 0009-0000-9542-2836
Tufan M OzChemistry and Chemical Engineering Division, California Institute of Technology, Pasadena, CA 91125.ORCID 0000-0002-0042-2671
Elisa GrilloBiology and Biological Engineering Division, California Institute of Technology, Pasadena, CA 91125.
Catherine GriffinBiology and Biological Engineering Division, California Institute of Technology, Pasadena, CA 91125.ORCID 0000-0002-1017-0690
Yunqing WangBiology and Biological Engineering Division, California Institute of Technology, Pasadena, CA 91125.
Kimberley T MuchenjeBiology and Biological Engineering Division, California Institute of Technology, Pasadena, CA 91125.
Jolie W JonesBiology and Biological Engineering Division, California Institute of Technology, Pasadena, CA 91125.
Gozde S DemirerChemistry and Chemical Engineering Division, California Institute of Technology, Pasadena, CA 91125.ORCID 0000-0002-3007-1489

Funding

Henry Luce Foundation (HLF) NANSF (NSF) 2330145NSF | NSF Graduate Research Fellowship Program (GRFP) NAShurl and Kay Curci Foundation (SKCF) NAU.S. Department of Agriculture (USDA) 2024-67019-42486
6 · The paper itself

Abstract

Microbial transformations of nitrogen in soils strongly influence plant nutrition and ecosystem function, yet monitoring these processes remains challenging. Existing approaches rely largely on extraction-based laboratory assays, limiting the ability to track nitrogen dynamics in situ. Here, we engineer "sentinel plants," genetically encoded plant biosensors that convert nitrate perception into a quantitative signal reporting plant-accessible nitrate. The sensor uses a synthetic nitrate-responsive promoter to drive a ratiometric luciferase reporter, enabling high-dynamic-range measurements. Sentinel plants exhibited a dose-dependent, reversible nitrate response with high specificity over alternative nitrogen sources. In agricultural soils from multiple California field sites, sensor output tracked analytically measured nitrate levels and resolved incremental nitrate amendments, reporting plant-accessible nitrate in complex soil matrices. Beyond environmental sensing, sentinel plants detected microbially generated nitrate in both liquid culture and a model soil. Using this platform, we characterized a minimal three-member microbial consortium that converted atmospheric nitrogen into plant-available nitrate via sequential nitrogen fixation and nitrification. This consortium increased tissue nitrate accumulation and plant fresh weight, demonstrating that sentinel plants can both monitor nitrate availability and characterize microbial communities that enhance plant growth.

Indexed as

Biosensing TechniquesNitratesPlantsSoilSoil MicrobiologyCaliforniaNitrificationNitrogenNitratesNitrogenSoilnitrateplant biosensorsplant–microbe interactionsrhizospheresynthetic biology

Identifiers

PMID42490377
PMCPMC13415691

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.