Evidence map›Paper›PMID 42484067›Full record

ArticleBiomacromolecules2026

A Water-Soluble Fluorogenic Probe to Quantify Azide Concentrations in Biologically Relevant Environments.

Lotte Gerrits, Lisa Verdellen, Marie Peeters, Arwen Gelderman, Ulysse J Gross, Behrad Shaghaghi, Roel Hammink, Paul H J Kouwer

Abstract read
In one paragraph

Article in Biomacromolecules, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lotte GerritsInstitute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen6525 AJ, The Netherlands.
Lisa VerdellenInstitute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen6525 AJ, The Netherlands.
Marie PeetersInstitute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen6525 AJ, The Netherlands.
Arwen GeldermanInstitute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen6525 AJ, The Netherlands.
Ulysse J GrossInstitute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen6525 AJ, The Netherlands.ORCID 0009-0005-5949-2649
Behrad ShaghaghiInstitute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen6525 AJ, The Netherlands.
Roel HamminkDepartment of Medical BioSciences, Radboudumc, Geert Grooteplein 26, Nijmegen6525 GA, The Netherlands.
Paul H J KouwerInstitute for Molecules and Materials, Radboud University, Heyendaalseweg 135, Nijmegen6525 AJ, The Netherlands.ORCID 0000-0002-2760-191X

Funding

Ministerie van Onderwijs, Cultuur en Wetenschap 024.001.035Ministerie van Onderwijs, Cultuur en Wetenschap 024.002.009Ministerie van Onderwijs, Cultuur en Wetenschap ICI00024
6 · The paper itself

Abstract

Fluorogenic probes are highly useful tools for the detection of target molecules in chemical biology and (bio)material science, as they can often be applied in situ and do not depend on purification. Over the past years, a variety of alkyne-based fluorogenic probes have been proposed to detect azides, paving the way for live cell imaging and biomaterial analysis. Unfortunately, undesirable photophysical properties and poor solubility in aqueous solutions hamper the widespread use of these fluorogenic compounds. This work describes a water-soluble azide probe with high fluorescence enhancement (130-fold increase in intensity) upon reaction. We find accurate determination of azide densities on a polymer scaffold at low micromolar concentrations in PBS buffer. Additionally, by functionalizing the probe with biomolecules, we built a single-step (bio)molecule labeling and analysis vehicle. As proof of principle, a peptide was conjugated to polymer scaffolds and conversions could be accurately followed in situ. Altogether, our probe is a promising new chemical biology tool for analysis in physiological conditions.

Indexed as

AzidesFluorescent DyesAlkynesFluorescent Chemosensor CompoundsPeptidesPolymersSolubilityWaterAlkynesAzidesFluorescent Chemosensor CompoundsFluorescent DyesPeptidesPolymersWater

Identifiers

PMID42484067
PMCPMC13463542

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.