Evidence map›Paper›PMID 42481690›Full record

ReviewNature metabolism2026

The impact of microbial metabolites on host chromatin and epigenetic regulation.

Tohfa Kabir, Zoe K Lawler, Leah A Gates

Abstract readReview
PubMed Publisher
In one paragraph

Review in Nature metabolism, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Tohfa KabirDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH, USA.
Zoe K LawlerDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH, USA.
Leah A GatesDepartment of Biochemistry, Case Western Reserve University, Cleveland, OH, USA. lag156@case.edu.ORCID http://orcid.org/0000-0001-6850-8167

Funding

Integration of metabolism and chromatin in regulating gene expression in vivoR00GM143550 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI Leah Ashley Gates · 2024 to 2026
$747k
NIGMS NIH HHS R00 GM143550U.S. Department of Health & Human Services | NIH | Center for Information Technology (Center for Information Technology, National Institutes of Health) R00GM1433550
6 · The paper itself

Abstract

The chemical diversity of histone post-translational modifications (PTMs), or histone marks, has been greatly expanded with the discovery of understudied and emerging modifications. The microbiome and microbial metabolites have been identified as crucial regulators of these novel PTMs, many of which have key roles in gene regulation. Thus, select histone marks represent a mechanism of host-microbe interaction via chromatin. This Perspective details the emerging roles of histone marks in gene regulation and host physiology. We discuss how these PTMs are regulated by microbial metabolism and the molecular mechanisms of how these microbiota-dependent histone PTMs affect host gene expression. We also highlight examples of the functional roles of these histone marks in physiology and disease, with a focus on the intestine and associated tissues. Understanding the mechanistic link between the microbiota and the host epigenome, particularly emerging histone marks, provides new avenues of how microbial metabolites influence host physiology.

Indexed as

BacteriaChromatinEpigenesis, GeneticMicrobiotaAnimalsHistone CodeHistonesHumansProtein Processing, Post-TranslationalChromatinHistones

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.