Evidence map›Paper›PMID 42479189›Full record

ArticleCurrent microbiology2026

Comparative Analysis of Multidrug Resistance and Virulence in Interconnected Clinical and Environmental Salmonella Strains from Karachi, Pakistan.

Yamina Usmani, Rabia Ilyas, Sidrah Asghar, Moatter Zehra, Zulfiqar Ali Mirani, Rao Muhammad Abid Khan, Shabana Usman Simjee, Ayaz Ahmed

Abstract readComparative Study
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Article in Current microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Yamina UsmaniInternational Center for Chemical and Biological Sciences (ICCBS), H.E.J. Research Institute of Chemistry, University of Karachi, Karachi, 75270, Pakistan.
Rabia IlyasDr. Panjwani Center for Molecular Medicine and Drug Research (PCMD), International Center for Chemical and Biological Sciences (ICCBS), University of Karachi, Karachi, 75270, Pakistan.
Sidrah AsgharDr. Panjwani Center for Molecular Medicine and Drug Research (PCMD), International Center for Chemical and Biological Sciences (ICCBS), University of Karachi, Karachi, 75270, Pakistan.
Moatter ZehraDr. Panjwani Center for Molecular Medicine and Drug Research (PCMD), International Center for Chemical and Biological Sciences (ICCBS), University of Karachi, Karachi, 75270, Pakistan.
Zulfiqar Ali MiraniMicrobiology Analytical Centre, FMRRC, PCSIR Laboratories Complex, Karachi, 75280, Pakistan.
Rao Muhammad Abid KhanDepartment of Microbiology, Sindh Institute of Urology and Transplantation (SIUT), Sindh Institute of Medical Sciences (SIMS), Karachi, 74200, Pakistan.
Shabana Usman SimjeeInternational Center for Chemical and Biological Sciences (ICCBS), H.E.J. Research Institute of Chemistry, University of Karachi, Karachi, 75270, Pakistan. shabana.simjee@iccs.edu.
Ayaz AhmedDr. Panjwani Center for Molecular Medicine and Drug Research (PCMD), International Center for Chemical and Biological Sciences (ICCBS), University of Karachi, Karachi, 75270, Pakistan. ayaz.ahmed@iccs.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antimicrobial resistance and inadequate sanitation, particularly in developing nations such as Pakistan, exacerbate the impact of Salmonella, a leading cause of foodborne and clinical infections worldwide. Effective surveillance and source tracking are hindered by a lack of comprehensive analyses linking clinical and environmental strains, despite increasing reports of resistant variants. This study uses disk diffusion, conventional PCR, and ERIC-PCR to compare clinical and environmental Salmonella strains from Karachi, with an emphasis on antibiotic resistance, virulence factors, and genetic relatedness. Multidrug resistance is highly prevalent, with 63% of clinical strains (41/65) (MARi: 0.3-0.8) and 34.5% of environmental strains (22/55) (MARi: 0.4-0.7) exhibiting resistance to multiple antibiotics. All strains were capable of forming biofilms, and the correlation between MARi and biofilm formation in both sources was weak and non-significant (p > 0.05). All strains from both sources harbored core virulence genes; however, three genes, fimA, spvR, and acrA, were significantly more prevalent in clinical than in environmental strains (p < 0.001 and p = 0.023). ERIC-PCR showed low to moderate DI (0.45 to 0.75) across different clinical Salmonella serovars and moderate DI across different environmental serovars, indicating heterogeneous and homogeneous genetic relatedness. These results suggest a crucial and underexplored connection between environmental and clinical Salmonella reservoirs, implying potential environmental contamination from clinical sources. The coexistence of multidrug resistance and virulence highlights the critical need for integrated surveillance strategies to minimize the risk of widespread outbreaks.

Indexed as

Drug Resistance, Multiple, BacterialEnvironmental MicrobiologySalmonellaSalmonella InfectionsVirulence FactorsAnti-Bacterial AgentsBiofilmsHumansMicrobial Sensitivity TestsPakistanPolymerase Chain ReactionVirulenceAnti-Bacterial AgentsVirulence Factors

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