Evidence map›Paper›PMID 42478886›Full record

ArticleRapid communications in mass spectrometry : RCM2026

Metabolic Profiling Using Gas Chromatography-Mass Spectrometry and Optimization of Light-Emitting Diodes for Callus Induction in Patchouli "Tapak Tuan" (Pogostemon cablin Benth.).

Essy Harnelly, Alya Munira, Ayyagari Ramlal, Sreeramanan Subramaniam, Khairan Khairan

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Article in Rapid communications in mass spectrometry : RCM, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Essy HarnellyDepartment of Biology, Faculty of Mathematics and Natural Sciences, Syiah Kuala University, Banda Aceh, Indonesia.ORCID https://orcid.org/0000-0001-8515-7493
Alya MuniraDepartment of Biology, Faculty of Mathematics and Natural Sciences, Syiah Kuala University, Banda Aceh, Indonesia.ORCID https://orcid.org/0009-0007-0299-0182
Ayyagari RamlalSchool of Biological Sciences, Universiti Sains Malaysia, Georgetown, Penang, Malaysia.ORCID https://orcid.org/0000-0002-1093-9877
Sreeramanan SubramaniamSchool of Biological Sciences, Universiti Sains Malaysia, Georgetown, Penang, Malaysia.ORCID https://orcid.org/0000-0003-4392-285X
Khairan KhairanARC PUI-PT Nilam Aceh, Syiah Kuala University, Banda Aceh, Indonesia.ORCID https://orcid.org/0000-0003-3028-6022

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionPatchouli is an aromatic medicinal plant. The essential oil from patchouli is widely used in the perfume and pharmaceutical industries. In vitro culture systems provide a sustainable platform for increasing biomass and secondary metabolite exploration; however, the role of light quality in regulating these responses in Tapak Tuan patchouli callus remains underexplored.

objectiveThis study compared the effects of blue, red, and white light-emitting diodes (LEDs) with fluorescent light as the control on patchouli callus cultures.

resultsAfter 8 weeks, blue LEDs produced the highest callus fresh weight (7.34 ± 0.29) and promoted early organogenic responses, with shoot primordia observed in all explants, although complete plantlets were not obtained during the culture period. Red LED treatment showed the strongest qualitative flavonoid reaction based on phytochemical screening. Further GC-MS-based metabolite profiling, expressed as relative peak area (%), indicated that red LED-treated callus had the highest number of detected compounds, including several treatment-associated compounds, whereas blue LED-treated callus showed the presence of pogostone, a pharmacologically relevant metabolite. These results indicate that different light treatments, representing both spectral and PPFD differences, were associated with distinct callus growth responses and metabolite profiles in patchouli callus.

conclusionThe integration of qualitative phytochemical screening and descriptive GC-MS profiling provides preliminary insights into LED-associated variation in patchouli callus cultures and highlights the potential use of targeted lighting strategies for optimizing biomass production and metabolite profiling. Future studies using standardized PPFD, replicated GC-MS analysis, internal standards, and quantitative biochemical assays are needed to validate these findings and clarify the underlying mechanisms.

Indexed as

Gas Chromatography-Mass SpectrometryMetabolomeMetabolomicsPogostemonBlue LightFlavonoidsLightOils, VolatileRed LightFlavonoidsOils, Volatileflavonoidleaf calluslight‐emitting diodespatchouliphytochemical screeningTapak Tuan cultivar

Identifiers

PMID42478886
PMCPMC13387076

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.