Evidence map›Paper›PMID 42477132›Full record

ArticleThe EMBO journal2026

Atg23 prevents aberrant fusion of Atg9 vesicles during delivery to autophagosome formation sites.

Takumi Kimura, Takayuki Shima, Tetsuya Kotani, Hitoshi Nakatogawa

Abstract read
In one paragraph

Article in The EMBO journal, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Takumi KimuraCell Biology Center, Institute of Integrated Research, Institute of Science Tokyo, Yokohama, Japan.ORCID http://orcid.org/0009-0001-9639-6884
Takayuki ShimaSchool of Life Science and Technology, Institute of Science Tokyo, Yokohama, Japan.ORCID http://orcid.org/0000-0003-4480-3959
Tetsuya KotaniCell Biology Center, Institute of Integrated Research, Institute of Science Tokyo, Yokohama, Japan.
Hitoshi NakatogawaCell Biology Center, Institute of Integrated Research, Institute of Science Tokyo, Yokohama, Japan. hnakatogawa@cbc.iir.isct.ac.jp.ORCID http://orcid.org/0000-0002-5828-0741

Funding

Ministry of Education, Culture, Sports, Science and Technology (MEXT) 25K09544Ministry of Education, Culture, Sports, Science and Technology (MEXT) JP19H05708Ministry of Education, Culture, Sports, Science and Technology (MEXT) JP23K20044Ministry of Education, Culture, Sports, Science and Technology (MEXT) JP25H01322
6 · The paper itself

Abstract

Autophagosome biogenesis depends on the accurate delivery of membrane lipids to the pre-autophagosomal structure. Golgi/endosome-derived Atg9 vesicles provide the membrane seed for this process, but how they are trafficked through the cytoplasm while avoiding inappropriate fusion remains unclear. Here we show that in Saccharomyces cerevisiae, the soluble Atg9-interacting protein Atg23 remains associated with Atg9 vesicles after their biogenesis. This association shields Atg9 vesicles from aberrant SNARE-dependent fusion as they diffuse through the cytoplasm en route to the autophagosome formation site. We further show that upon vesicle arrival at the site, Atg9 phosphorylation by the autophagy initiation kinase Atg1 releases Atg23, facilitating recruitment of the downstream factor Atg2, a lipid transfer protein for membrane expansion. Together, these findings reveal an Atg1-dependent phosphorylation switch that regulates Atg9 vesicle dynamics during autophagosome biogenesis.

Indexed as

AutophagosomesAutophagyMembrane FusionMembrane ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAutophagy-Related ProteinsPhosphorylationProtein KinasesSNARE ProteinsVesicular Transport ProteinsATG1 protein, S cerevisiaeATG2 protein, S cerevisiaeATG9 protein, S cerevisiaeAutophagy-Related ProteinsMembrane ProteinsProtein KinasesSaccharomyces cerevisiae ProteinsSNARE ProteinsVesicular Transport Proteins

Identifiers

PMID42477132
PMCPMC13534743

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.