Evidence map›Paper›PMID 42474804›Full record

ArticleArchives of virology2026

Genetic variability of blainvillea yellow spot virus (Begomovirus blainvilleae) reveals recombinant variants and a distinct nonanucleotide motif.

Marcelo H O Gonçalves, Ayane F F Quadros, Mayra M M Ferro, Anelise F Orílio, João Paulo H Silva, Julia B Lage, Sarah J C Silva, F Murilo Zerbini

Abstract read
In one paragraph

Article in Archives of virology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Marcelo H O GonçalvesDepartamento de Fitopatologia/BIOAGRO, Universidade Federal de Viçosa, Viçosa, MG, 36570-900, Brazil. marcelo.h.goncalves@ufv.br.ORCID http://orcid.org/0000-0002-1744-1510
Ayane F F QuadrosDepartamento de Fitopatologia/BIOAGRO, Universidade Federal de Viçosa, Viçosa, MG, 36570-900, Brazil.ORCID http://orcid.org/0000-0001-8899-5310
Mayra M M FerroSetor de Fitossanidade, Campus de Engenharias e Ciências Agrárias, Universidade Federal de Alagoas, Rio Largo, AL, 57100-000, Brazil.ORCID http://orcid.org/0000-0002-4362-8127
Anelise F OrílioDepartamento de Fitopatologia/BIOAGRO, Universidade Federal de Viçosa, Viçosa, MG, 36570-900, Brazil.ORCID http://orcid.org/0000-0002-0458-8644
João Paulo H SilvaDepartamento de Fitopatologia/BIOAGRO, Universidade Federal de Viçosa, Viçosa, MG, 36570-900, Brazil.ORCID http://orcid.org/0000-0002-3108-5313
Julia B LageDepartamento de Fitopatologia/BIOAGRO, Universidade Federal de Viçosa, Viçosa, MG, 36570-900, Brazil.ORCID http://orcid.org/0009-0008-0019-3662
Sarah J C SilvaSetor de Fitossanidade, Campus de Engenharias e Ciências Agrárias, Universidade Federal de Alagoas, Rio Largo, AL, 57100-000, Brazil.ORCID http://orcid.org/0000-0001-9336-4126
F Murilo ZerbiniDepartamento de Fitopatologia/BIOAGRO, Universidade Federal de Viçosa, Viçosa, MG, 36570-900, Brazil. zerbini@ufv.br.ORCID http://orcid.org/0000-0001-8617-0200

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Viruses from wild plants may emerge as new economically important agricultural pathogens through spillover events. Blainvillea yellow spot virus (Begomovirus blainvilleae, BlYSV) is a bipartite geminivirus which is ubiquitous in the non-cultivated plant Blainvillea rhomboidea. To better understand the ecological and evolutionary aspects of this virus, we sampled B. rhomboidea in three Brazilian states between 2020 and 2023. Following rolling-circle amplification, cloning and Sanger sequencing, a dataset was assembled with 23 complete DNA-A sequences plus an additional set of 30 BlYSV sequences retrieved from GenBank. Four variants (named A to D) were identified based on sequence comparisons, one of which (variant A) was classified as a different strain. A recombination event in variant B isolates, followed by positive selection in their AC4 gene, may have increased the fitness of these isolates, which replaced variant C isolates in Viçosa and Coimbra between 2014 and 2022. Four sequences in variant A exhibited a nucleotide substitution (A2667G) within the geminivirus conserved nonanucleotide motif (from TAATATTAC to TAATGTTAC). Our results confirm the high genetic variability of this virus which was hinted at in previous studies. Future studies will be directed at understanding the impact of the observed mutations in viral fitness, and whether this could facilitate spillover of BlYSV to other hosts, including cultivated plants.

Indexed as

BegomovirusGenetic VariationNyctaginaceaeRecombination, GeneticBase SequenceBrazilDNA, ViralGenome, ViralNucleotide MotifsPhylogenyPlant DiseasesSequence Analysis, DNADNA, Viral

Identifiers

PMID42474804
PMCPMC13385248

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.