Evidence map›Paper›PMID 42472122›Full record

ArticleiScience2026

A host-centric morphological profiling approach to identify repurposed antiviral drugs.

Elin Asp, Jonne Rietdijk, Marianna Tampere, Hanna Axelsson, Duncan Njenda, Swapnil Potdar, Adelinn Kalman, Polina Georgieva, Maris Lapins, Flavio Ballante and 11 more

Abstract read
In one paragraph

Article in iScience, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors.

Elin AspDepartment of Oncology and Pathology and Science for Life Laboratory, Karolinska Institutet, 171 76 Stockholm, Sweden.
Jonne RietdijkDepartment of Pharmaceutical Biosciences and Science for Life Laboratory, Uppsala University, 75124 Uppsala, Sweden.
Marianna TampereDepartment of Oncology and Pathology and Science for Life Laboratory, Karolinska Institutet, 171 76 Stockholm, Sweden.
Hanna AxelssonChemical Biology Consortium Sweden (CBCS), Science for Life Laboratory, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 17176 Stockholm, Sweden.
Duncan NjendaDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, 17176 Stockholm, Sweden.
Swapnil PotdarInstitute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.
Adelinn KalmanDepartment of Oncology and Pathology and Science for Life Laboratory, Karolinska Institutet, 171 76 Stockholm, Sweden.
Polina GeorgievaDepartment of Pharmaceutical Biosciences and Science for Life Laboratory, Uppsala University, 75124 Uppsala, Sweden.
Maris LapinsDepartment of Pharmaceutical Biosciences and Science for Life Laboratory, Uppsala University, 75124 Uppsala, Sweden.
Flavio BallanteChemical Biology Consortium Sweden (CBCS), Science for Life Laboratory, Department of Medical Biochemistry and Biophysics, Karolinska Institutet, 17176 Stockholm, Sweden.
Alicia SolerEuropean Infrastructure for Translational Medicine (EATRIS ERIC), Amsterdam, the Netherlands.
Martin de KortEuropean Infrastructure for Translational Medicine (EATRIS ERIC), Amsterdam, the Netherlands.
Tero AittokallioInstitute for Molecular Medicine Finland (FIMM), HiLIFE, University of Helsinki, Helsinki, Finland.
Andrea ZalianiFraunhofer Institute for Translational Medicine and Pharmacology (ITMP), 22525 Hamburg, Germany.
Maria KuzikovFraunhofer Institute for Translational Medicine and Pharmacology (ITMP), 22525 Hamburg, Germany.
Philip GribbonFraunhofer Institute for Translational Medicine and Pharmacology (ITMP), 22525 Hamburg, Germany.
Donald LoEuropean Infrastructure for Translational Medicine (EATRIS ERIC), Amsterdam, the Netherlands.
Jordi Carreras-PuigvertDepartment of Pharmaceutical Biosciences and Science for Life Laboratory, Uppsala University, 75124 Uppsala, Sweden.
Brinton Seashore-LudlowDepartment of Oncology and Pathology and Science for Life Laboratory, Karolinska Institutet, 171 76 Stockholm, Sweden.
Ola SpjuthDepartment of Pharmaceutical Biosciences and Science for Life Laboratory, Uppsala University, 75124 Uppsala, Sweden.
Päivi ÖstlingDepartment of Oncology and Pathology and Science for Life Laboratory, Karolinska Institutet, 171 76 Stockholm, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antiviral drug discovery has traditionally targeted viral proteins, while host-directed strategies remain underexplored. We present a systematic drug repurposing strategy that uses morphological profiling to identify host-targeting antivirals. Using cell painting, we demonstrate that SARS-CoV-2 infection can be accurately determined from the morphological profile of virus-infected cells. Moreover, morphological features reveal how host cells respond to viral exposure, offering insights into antiviral activity, host-cell health, and putative mechanisms of action of the compounds. Screening 5,275 repurposable compounds, we identified candidates that reversed the infected phenotype, including ones not detected by conventional cytopathicity and antibody-based assays. After deprioritization of confounding phospholipidosis, we present 74 hit candidates, including unreported compounds targeting host processes implicated in viral infection. This adaptable and scalable platform is suited for diverse viruses and cell systems. We provide a resource of open-access screening data, images, and analysis pipelines to advance antiviral discovery and pandemic preparedness.

Indexed as

cell paintingdrug repurposinghost-directed antiviralsmorphological profilingpandemic preparednessSARS-CoV-2

Identifiers

PMID42472122
PMCPMC13380429

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.