Evidence map›Paper›PMID 42467083›Full record

ArticleApplied microbiology and biotechnology2026

Development and analytical validation of a dual-gene isothermal assay for Nipah virus detection.

Shyam Sundar Nandi, Sonali A Sawant, Pragya D Yadav, Anita Shete-Aich, Triparna D Majumdar, Kalpesh C Bavkar, Anupam Mukherjee, Jagadish M Deshpande

Abstract readValidation Study
In one paragraph

Article in Applied microbiology and biotechnology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Shyam Sundar Nandi *ICMR - National Institute of Virology, Mumbai Unit, Haffkine Institute Compound, AD Marg Parel, Mumbai, 400012, Maharashtra, India. nandibiotech@gmail.com.
Sonali A Sawant *ICMR - National Institute of Virology, Mumbai Unit, Haffkine Institute Compound, AD Marg Parel, Mumbai, 400012, Maharashtra, India.
Pragya D YadavICMR - National Institute of One Health, Highland Dr Rd, Seminary Hills, Nagpur, 440006, Maharashtra, India.
Anita Shete-AichICMR - National Institute of Virology, 20A Dr. Ambedkar Road, Pune, 411001, Maharashtra, India.
Triparna D MajumdarICMR - National Institute of Virology, 20A Dr. Ambedkar Road, Pune, 411001, Maharashtra, India.
Kalpesh C BavkarICMR - National Institute of Virology, Mumbai Unit, Haffkine Institute Compound, AD Marg Parel, Mumbai, 400012, Maharashtra, India.
Anupam MukherjeeICMR - National Institute of Virology, 20A Dr. Ambedkar Road, Pune, 411001, Maharashtra, India.
Jagadish M DeshpandeICMR - National Institute of Virology, Mumbai Unit, Haffkine Institute Compound, AD Marg Parel, Mumbai, 400012, Maharashtra, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nipah virus (NiV) is a highly pathogenic zoonotic virus characterized by fatal encephalitis and severe respiratory illness, with case-fatality rates reaching 75%. Given the lack of licensed vaccines or therapeutics, rapid and accurate detection is paramount for outbreak containment. While real-time reverse transcription polymerase chain reaction (qRT-PCR) remains the gold standard, its requirement for sophisticated laboratory infrastructure limits its utility in resource-constrained field settings. In this study, we developed and validated a rapid, colorimetric dual-target reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay targeting the conserved matrix and nucleocapsid genes to enhance diagnostic reliability. Optimized at 62 °C for 40 min, the assay provides a clear visual colorimetric interpretation. A total of 137 samples were evaluated: in vitro-transcribed (IVT) RNA and tissue culture fluid isolate dilutions for limit of detection assessment, 57 non-NiV viral samples for cross-reactivity assessment, and 10 experimentally spiked positive clinical matrices used as proxy clinical specimens together with 50 confirmed NiV-negative clinical swabs for preliminary proxy diagnostic performance evaluation. The dual-target assay demonstrated 100% analytical sensitivity (95% confidence interval or CI, 72.2-100.0) and 100% specificity (95% CI, 92.9-100.0), showing perfect agreement (κ = 1.00) with real-time reverse transcription polymerase chain reaction (qRT-PCR). The composite "matrix or nucleocapsid" interpretation rule supported complete detection in the tested proxy positive clinical-matrix specimens. This simple, cost-effective, and portable molecular tool is well-suited for decentralized diagnostics, supporting early detection and surveillance in NiV-endemic regions.

Indexed as

Henipavirus InfectionsMolecular Diagnostic TechniquesNipah VirusNucleic Acid Amplification TechniquesAnimalsColorimetryHumansRapid Diagnostic TestsReproducibility of ResultsRNA, ViralSensitivity and SpecificityRNA, ViralColorimetric detectionDual-targetNipah virusPoint-of-careRT-LAMP

Identifiers

PMID42467083
PMCPMC13658751

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.