Evidence map›Paper›PMID 42465341›Full record

ArticlebioRxiv : the preprint server for biology2026

Plasmid-encoded host reprogramming promotes plasmid dissemination.

Chloé Virolle, Sibylle Ferrarin, Gaël Panis, Yannick Baffert, Annick Dedieu-Berne, Jérémy Guérin, Julien Cayron, Daouda A K Traoré, Sofía Martínez-Absalón, Rania Zenati and 9 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Chloé VirolleMolecular Microbiology and Structural Biochemistry (MMSB), Université Lyon 1, CNRS, Inserm, UMR5086, 69007 Lyon, France.ORCID 0000-0001-5791-8064
Sibylle FerrarinMolecular Microbiology and Structural Biochemistry (MMSB), Université Lyon 1, CNRS, Inserm, UMR5086, 69007 Lyon, France.ORCID 0009-0007-0190-1934
Gaël PanisDepartment of Microbiology and Molecular Medicine, Faculty of Medicine, University of Geneva, Geneva, Switzerland.ORCID 0000-0002-6926-6224
Yannick BaffertMolecular Microbiology and Structural Biochemistry (MMSB), Université Lyon 1, CNRS, Inserm, UMR5086, 69007 Lyon, France.
Annick Dedieu-BerneMolecular Microbiology and Structural Biochemistry (MMSB), Université Lyon 1, CNRS, Inserm, UMR5086, 69007 Lyon, France.ORCID 0000-0002-9982-8793
Jérémy GuérinMolecular Microbiology and Structural Biochemistry (MMSB), Université Lyon 1, CNRS, Inserm, UMR5086, 69007 Lyon, France.
Julien CayronMolecular Microbiology and Structural Biochemistry (MMSB), Université Lyon 1, CNRS, Inserm, UMR5086, 69007 Lyon, France.ORCID 0000-0002-6607-311X
Daouda A K TraoréFaculté des Sciences et Techniques, Université des Science Techniques et Technologiques de Bamako (USTTB), Bamako, Mali.ORCID 0000-0003-1001-4716
Sofía Martínez-AbsalónDepartment of Chemical Engineering, University of Rochester, Rochester, New York, USA.ORCID 0000-0003-3183-5468
Rania ZenatiMolecular Microbiology and Structural Biochemistry (MMSB), Université Lyon 1, CNRS, Inserm, UMR5086, 69007 Lyon, France.
Frédéric DelolmeProtein Science Facility, SFR BioScience, CNRS, University Lyon 1, ENS, 69007 Lyon.ORCID 0000-0003-0320-0764
Adeline PageProtein Science Facility, SFR BioScience, CNRS, University Lyon 1, ENS, 69007 Lyon.ORCID 0000-0001-7885-1014
Sarah BigotMolecular Microbiology and Structural Biochemistry (MMSB), Université Lyon 1, CNRS, Inserm, UMR5086, 69007 Lyon, France.ORCID 0000-0002-9340-6303
Yoshiharu YamaichiUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), 91198 Gif-sur-Yvette, France.ORCID 0000-0003-0835-5407
Allison LopatkinDepartment of Chemical Engineering, University of Rochester, Rochester, New York, USA.ORCID 0000-0003-0018-9205
Patrick H ViollierDepartment of Microbiology and Molecular Medicine, Faculty of Medicine, University of Geneva, Geneva, Switzerland.ORCID 0000-0002-5249-9910
David BursteinThe Shmunis School of Biomedicine and Cancer Research, George S. Wise Faculty of Life Sciences, Tel-Aviv University, Tel-Aviv, Israel.ORCID 0000-0002-6219-1880
Laurent TerradotMolecular Microbiology and Structural Biochemistry (MMSB), Université Lyon 1, CNRS, Inserm, UMR5086, 69007 Lyon, France.ORCID 0000-0003-4279-9167
Christian LesterlinMolecular Microbiology and Structural Biochemistry (MMSB), Université Lyon 1, CNRS, Inserm, UMR5086, 69007 Lyon, France.ORCID 0000-0002-9108-0848

Funding

Determinants underlying horizontal gene transfer-mediated pathogen successR35GM150871 · NIGMS · UNIVERSITY OF ROCHESTER · PI Allison Lopatkin · 2023 to 2026
$1.7M
NIGMS NIH HHS R35 GM150871
6 · The paper itself

Abstract

Conjugative plasmids are major drivers of antibiotic resistance dissemination, yet how newly transferred plasmids establish in recipient cells remains poorly understood. Here we investigate YfjB, a previously uncharacterized conserved leading-region protein, which is zygotically induced immediately after plasmid entry and acts specifically during the earliest post-transfer stages. Multi-omics analyses reveal that YfjB reprograms host transcription, triggering extensive metabolic rewiring that compensates the transient fitness cost of plasmid acquisition. Structural analyses show that YfjB is a ParB-like protein containing a CTP-binding domain and a helix-turn-helix DNA-binding motif, linked to a previously uncharacterized dimerization module that forms a V-shaped clamp-like architecture compatible with DNA loading. Consistently, live-cell imaging reveals nucleoid-associated foci in transconjugants, and ChIP-seq identifies multiple chromosomal binding sites. We therefore rename the protein HerB (Host Expression Reprogrammer, ParB-like). More broadly, our findings reveal how mobile genetic elements facilitate their dissemination by transiently subverting host physiology.

Indexed as

DNA conjugationHorizontal gene transferlive-cell microscopyplasmid fitness costresistance-plasmid disseminationtranscriptomic reprogrammingzygotic induction

Identifiers

PMID42465341
PMCPMC13370423

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.