Evidence map›Paper›PMID 42465335›Full record

ArticlebioRxiv : the preprint server for biology2026

Programmed DNA elimination was present in the last common ancestor of

Lewis Stevens, Simo Sun, Nami Haruta, Yasunobu Maeda, Leyun Xiao, Naoki Uwatoko, Manuela Kieninger, Kazuki Sato, Akemi Yoshida, Dominic Absolon and 4 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Lewis StevensTree of Life, Wellcome Sanger Institute, Hinxton CB10 1SA, UK.ORCID 0000-0002-6075-8273
Simo SunDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.ORCID 0000-0003-0481-0468
Nami HarutaGraduate School of Life Sciences, Tohoku University, Aoba-ku, Sendai, Japan.ORCID 0000-0002-4232-9635
Yasunobu MaedaDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.
Leyun XiaoDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.ORCID 0009-0003-3091-7936
Naoki UwatokoGraduate School of Life Sciences, Tohoku University, Aoba-ku, Sendai, Japan.ORCID 0009-0005-9677-1313
Manuela KieningerTree of Life, Wellcome Sanger Institute, Hinxton CB10 1SA, UK.ORCID 0000-0002-1841-0273
Kazuki SatoDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.ORCID 0000-0003-2182-6883
Akemi YoshidaDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.
Dominic AbsolonTree of Life, Wellcome Sanger Institute, Hinxton CB10 1SA, UK.ORCID 0009-0004-5709-2249
Joanna CollinsTree of Life, Wellcome Sanger Institute, Hinxton CB10 1SA, UK.ORCID 0000-0001-5782-5028
Asako SugimotoGraduate School of Life Sciences, Tohoku University, Aoba-ku, Sendai, Japan.ORCID 0000-0001-6001-4293
Taisei KikuchiDepartment of Integrated Biosciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan.ORCID 0000-0003-2759-9167
Mark BlaxterTree of Life, Wellcome Sanger Institute, Hinxton CB10 1SA, UK.ORCID 0000-0003-2861-949X

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
NIH HHS P40 OD010440Wellcome Trust
6 · The paper itself

Abstract

In most organisms, all cells inherit the same genome, and many mechanisms exist to preserve its integrity across cell divisions. Programmed DNA elimination (PDE), the targeted removal of specific genomic regions from somatic cell lineages during early embryogenesis, is a striking exception. Since its discovery in parasitic nematodes over a century ago, PDE has been observed in diverse eukaryotes, including ciliates, arthropods, and vertebrates. However, the mechanisms, functions, and evolutionary origins of PDE remain poorly understood. Here, we describe the discovery of PDE in three species of the free-living nematode genus

Identifiers

PMID42465335
PMCPMC13370393

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.