Evidence map›Paper›PMID 42465305›Full record

ArticlebioRxiv : the preprint server for biology2026

An engineered biofactory for efficient production of diverse recombinant superoxide dismutase isozymes loaded with specific metal ions for biochemical characterization.

Mariam Esmaeeli, Agnieszka Kołpa, Rafał Mazgaj, Justyna Pełczyńska, Diana Galea, Jan Gawor, Agata Malinowska, Agnieszka Szczypiorowska, Thomas E Kehl-Fie, Kevin J Waldron

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Mariam EsmaeeliInstitute of Biochemistry & Biophysics, Polish Academy of Science, Warsaw 02-106, Poland.ORCID 0000-0001-7722-4713
Agnieszka KołpaInstitute of Biochemistry & Biophysics, Polish Academy of Science, Warsaw 02-106, Poland.
Rafał MazgajInstitute of Biochemistry & Biophysics, Polish Academy of Science, Warsaw 02-106, Poland.ORCID 0000-0001-6706-0882
Justyna PełczyńskaInstitute of Biochemistry & Biophysics, Polish Academy of Science, Warsaw 02-106, Poland.ORCID 0000-0001-6135-5110
Diana GaleaInstitute of Biochemistry & Biophysics, Polish Academy of Science, Warsaw 02-106, Poland.ORCID 0009-0000-2209-6216
Jan GaworInstitute of Biochemistry & Biophysics, Polish Academy of Science, Warsaw 02-106, Poland.ORCID 0000-0003-3800-2557
Agata MalinowskaInstitute of Biochemistry & Biophysics, Polish Academy of Science, Warsaw 02-106, Poland.ORCID 0000-0001-6599-901X
Agnieszka SzczypiorowskaInstitute of Biochemistry & Biophysics, Polish Academy of Science, Warsaw 02-106, Poland.
Thomas E Kehl-FieDepartment of Microbiology and Immunology, University of Iowa, Iowa City, Iowa, USA.ORCID 0000-0001-8234-1113
Kevin J WaldronInstitute of Biochemistry & Biophysics, Polish Academy of Science, Warsaw 02-106, Poland.ORCID 0000-0002-5577-7357

Funding

Leveraging host-imposed metal starvation to elucidate the molecular and environmental factors that dictate metal utilization by the iron/manganese superoxide dismutase superfamilyR01AI155611 · NIAID · UNIVERSITY OF IOWA · PI KEHL-FIE, THOMAS EVERETT · 2021 to 2025
$2.8M
NIAID NIH HHS R01 AI155611
6 · The paper itself

Abstract

Background: Biochemical, biophysical and structural characterisation of isozymes from the ubiquitous family of iron- or manganese-dependent superoxide dismutases (SodFMs) requires the purification of high-quality preparations of recombinant enzymes. Determination of their key biochemical parameter, their catalytic metal-preference, requires the comparison of the catalytic turnover of samples loaded exclusively with iron versus samples loaded exclusively with manganese. Both of these aims are inhibited by the potential contamination of recombinant preparations of SodFMs, prepared by heterologous overexpression inside Results: Genomic analysis verified the targeted gene deletions, without off-target effects. Growth, expression, elemental analysis, and proteomic data confirmed a lack of physiological defects of the strain except for a known inability to grow on glucose, which is overcome by heterologous SodFM expression. We demonstrate the utility of the strain for the efficient production of diverse recombinant SodFMs, including highly divergent, understudied isozymes, including the ability to precisely control the metal-loading of the heterologously expressed protein. Conclusions: The

Indexed as

cell factoryEscherichia coligenomeproteomicssuperoxide dismutase

Identifiers

PMID42465305
PMCPMC13370989

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.