Evidence map›Paper›PMID 42461053›Full record

ArticlemBio2026

VirD4 coupling proteins suppress accumulation of conjugative pili produced by type IV secretion systems.

Pratick Khara, Erin Hancock, Kouhei Kishida, Yang Grace Li, Peter J Christie

Abstract read
In one paragraph

Article in mBio, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Pratick KharaDepartment of Microbiology and Molecular Genetics, McGovern Medical School, UTHealth at Houston, Houston, Texas, USA.
Erin HancockDepartment of Microbiology and Molecular Genetics, McGovern Medical School, UTHealth at Houston, Houston, Texas, USA.
Kouhei KishidaDepartment of Microbiology and Molecular Genetics, McGovern Medical School, UTHealth at Houston, Houston, Texas, USA.ORCID 0009-0007-4895-9535
Yang Grace LiDepartment of Microbiology and Molecular Genetics, McGovern Medical School, UTHealth at Houston, Houston, Texas, USA.ORCID 0000-0003-4870-5838
Peter J ChristieDepartment of Microbiology and Molecular Genetics, McGovern Medical School, UTHealth at Houston, Houston, Texas, USA.ORCID 0000-0002-9799-7067

Funding

Biological And Structural Diversity Of Bacterial Type IV Secretion SystemsR35GM131892 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI PETER j. CHRISTIE · 2019 to 2026
$3.8M
NIGMS NIH HHS R35 GM131892NIH HHS R35GM131892
6 · The paper itself

Abstract

Conjugation machines constitute a large subfamily of the bacterial type IV secretion systems (T4SSs). In the absence of recipient cell contact, conjugation machines of gram-negative bacteria produce conjugative pili by extracting pilin subunits from an inner membrane (IM) pool. Upon pilus-mediated or direct contact with a target cell, conjugation systems transition to the recruitment of a cognate mobile element for intercellular DNA transfer. T4SS subunit requirements for pilus assembly and substrate transfer are nearly the same, except that VirD4 is required only for the latter. VirD4 ATPases (also termed type IV coupling proteins [T4CPs]) stimulate early DNA processing reactions and physically couple the DNA substrate to the T4SS channel. By visualizing fluorescently labeled pili, we identified marked differences in numbers, gross morphologies, and cellular organization of pili encoded by IncF F and IncN pKM101 plasmids. Remarkably, deletion of T4CP genes from both plasmids conferred hyperpiliation, a phenotype suppressed by complementation with the wild-type gene, but not alleles encoding variants defective in nucleotide binding/hydrolysis, or DNA substrate binding. In the pKM101 system, the T4CP plus TraK, a DNA processing factor that directs relaxosome assembly at the plasmid's origin-of-transfer (

Indexed as

Adenosine TriphosphatasesBacterial ProteinsConjugation, GeneticEscherichia coliEscherichia coli ProteinsFimbriae, BacterialType IV Secretion SystemsPlasmidsAdenosine TriphosphatasesBacterial ProteinsEscherichia coli ProteinsType IV Secretion Systemsconjugationconjugative pilusfluorescence microscopyhorizontal DNA transfermobile genetic elementstype IV secretion

Identifiers

PMID42461053
PMCPMC13463995

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.