Evidence map›Paper›PMID 42455285›Full record

ArticleEnvironmental science and pollution research international2026

Effects of pristine and citrate-coated zinc oxide nanoparticles on soil nitrogen cycling determined using multi-level assessment of enzyme activity, functional gene abundance and microbial community composition.

Ahmed Hussain, Mohammad Jahid Hasan, Kiran Vadde, Akanksha Matta, Matthew Moreno, Esteban E Ureña-Benavides, Vikram Kapoor

Abstract read
In one paragraph

Article in Environmental science and pollution research international, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ahmed HussainSchool of Civil & Environmental Engineering, and Construction Management, The University of Texas at San Antonio, San Antonio, TX, 78249, USA.
Mohammad Jahid HasanDepartment of Biomedical Engineering and Chemical Engineering, The University of Texas at San Antonio, San Antonio, TX, 78249, USA.
Kiran VaddeSchool of Civil & Environmental Engineering, and Construction Management, The University of Texas at San Antonio, San Antonio, TX, 78249, USA.
Akanksha MattaDepartment of Chemistry, The University of Texas at San Antonio, San Antonio, TX, 78249, USA.
Matthew MorenoDepartment of Biomedical Engineering and Chemical Engineering, The University of Texas at San Antonio, San Antonio, TX, 78249, USA.
Esteban E Ureña-BenavidesDepartment of Biomedical Engineering and Chemical Engineering, The University of Texas at San Antonio, San Antonio, TX, 78249, USA.
Vikram KapoorSchool of Civil & Environmental Engineering, and Construction Management, The University of Texas at San Antonio, San Antonio, TX, 78249, USA. vikram.kapoor@utsa.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Zinc oxide (ZnO) nanoparticles (NPs) are increasingly detected in agricultural soils, yet their long-term effects on soil nitrogen cycling microorganisms, particularly how surface chemistry modulates toxicity, remain poorly understood. These nanoparticles frequently enter agricultural soils directly using nanopesticides and fertilizers or indirectly through irrigation or sewage sludge application, potentially harming soil microorganisms. This study investigates the effects of pristine and citrate-coated ZnO NPs on the physiological and genetic responses of nitrifying bacteria in soil microcosms. Pristine and citrate-coated ZnO NPs were synthesized in-house and introduced to soil at three concentrations: low (0.01 mg/g), medium (0.1 mg/g), and high (0.5 mg/g). Over a 105-day period, enzyme assays (ammonia monooxygenase [AMO], nitrite oxidoreductase [NXR], nitrite reductase [NIR], hydroxylamine dehydrogenase [HAO]), qPCR of functional genes (amoA, arch-amoA, nirK, norA, hao), and 16S rRNA gene sequencing were used to track microbial responses. Results showed concentration and citrate-dependent effects. AMO and NXR activities increased early in citrate-coated ZnO NPs and high treatments but declined at later stages, while NIR gradually decreased. Gene abundance patterns supported these trends, with citrate-coated ZnO NPs amplifying amoA and arch-amoA. Sequencing data indicated substantial shifts in microbial community structure, with notable differences in alpha and beta diversity. Untreated soils maintained higher richness and evenness, whereas high-concentration treatments, particularly citrate-coated ZnO NPs, reduced microbial diversity and altered community clustering. Functional groups responded unevenly, with ammonia- and nitrite-oxidizers increasing while nitrogen-fixers and denitrifiers declined. These findings suggest that ZnO nanoparticles, particularly in citrate-coated form at higher concentrations, may disturb soil microbial functions and shift nitrogen cycling pathways. This highlights potential ecological risks of nanoparticle accumulation in agricultural soils.

Indexed as

Nitrogen CycleSoil MicrobiologyZinc OxideBacteriaCitric AcidMetal NanoparticlesMicrobiotaNanoparticlesNitrogenOxidoreductasesRNA, Ribosomal, 16SSoilSoil Pollutantsammonia monooxygenaseCitric AcidNitrogenOxidoreductasesRNA, Ribosomal, 16SSoilSoil PollutantsZinc OxideAmmonia monooxygenaseMetal oxide nanoparticlesNitrifying bacteriaNitrogen cycleQPCRSoil

Identifiers

PMID42455285
PMCPMC13424076

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.