Pan-Genome and Transcriptome-Guided Analysis Reveals Duplication-Driven Evolution and Candidate MYB-bHLH Modules Associated with Fruit Development in Pear.

Guoming Wang, Nan Zhu, Xun Sun, Kaijie Qi, Zhihua Guo

Abstract read

In one paragraph

Article in Plants (Basel, Switzerland), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed

–field-weighted citation impact

1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Guoming WangJiangsu Key Laboratory for Conservation and Utilization of Plant Resources, Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing 210014, China.ORCID 0000-0001-6572-9263

Nan ZhuJiangsu Engineering Research Center for Pear, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.

Xun SunJiangsu Engineering Research Center for Pear, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.

Kaijie QiJiangsu Engineering Research Center for Pear, College of Horticulture, Nanjing Agricultural University, Nanjing 210095, China.

Zhihua GuoCollege of Agriculture, Shihezi University, Shihezi 832003, China.

Funding

the Natural Science Foundation of Jiangsu Province, China BK20230757Xinjiang Tianchi Talents Program BT-2025-TCYC-0065

6 · The paper itself

Abstract

Gene duplication and subsequent selection are central to genome evolution and transcription factor diversification, but the conservation and divergence of the basic helix-loop-helix (bHLH) family in pear remain unclear from a pan-genome perspective. Here, we performed a pan-genome and transcriptome-guided analysis across 15 pear genome assemblies, including Asian pear, European pear, and hybrid/haplotype assemblies. Genome-wide duplicated gene pairs were classified into different duplication types, and Ka, Ks, and Ka/Ks values were calculated to establish an evolutionary background for duplicated pear genes. Based on this framework, 3222

Indexed as

bHLHfruit developmentMYBpan-genomepear

Identifiers

PMID42452169

DOI10.3390/plants15131961

PMCPMC13364276

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.