Evidence map›Paper›PMID 42450039›Full record

ArticleInternational journal of molecular sciences2026

Training PBertKla on an Integrated Multi-Source Dataset with a Machine-Learning Layer for Lysine Lactylation Site Prediction.

Seung Beom Jin, Junghee Park, Summer Dabin Lee, Ji Hye Han, Seung-Hyun Myung, Kichul Park, Jisoo Yun

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Seung Beom JinLNPsolution, 199-9 Dugaebisan-ro, Hongcheon-gun 25114, Gangwon-do, Republic of Korea.
Junghee ParkDepartment of Biochemistry and Molecular Biology, Chosun University School of Medicine, 309 Pilmoon-daero, Dong-gu, Gwangju 61452, Republic of Korea.ORCID 0000-0003-2719-4522
Summer Dabin LeeLNPsolution, 199-9 Dugaebisan-ro, Hongcheon-gun 25114, Gangwon-do, Republic of Korea.
Ji Hye HanDepartment of Biochemistry and Molecular Biology, Chosun University School of Medicine, 309 Pilmoon-daero, Dong-gu, Gwangju 61452, Republic of Korea.
Seung-Hyun MyungDepartment of Biochemistry and Molecular Biology, Chosun University School of Medicine, 309 Pilmoon-daero, Dong-gu, Gwangju 61452, Republic of Korea.
Kichul ParkLNPsolution, 199-9 Dugaebisan-ro, Hongcheon-gun 25114, Gangwon-do, Republic of Korea.ORCID 0000-0002-0555-2942
Jisoo YunDepartment of Biochemistry and Molecular Biology, Chosun University School of Medicine, 309 Pilmoon-daero, Dong-gu, Gwangju 61452, Republic of Korea.

Funding

Ministry of Education RS-2023-00285353Ministry of Science and ICT RQT-25-120222Ministry of SMEs and Startups RS-2025-25461709
6 · The paper itself

Abstract

Lysine lactylation (Kla) is a recently discovered post-translational modification implicated in energy metabolism, cellular reprogramming, and disease progression. Here, we train the existing ProteinBERT-based predictor PBertKla on an integrated multi-source dataset and augment it with a lightweight machine-learning (ML) layer over sequence-derived features to predict Kla sites; on a common blind test set, the resulting model (PBertKla + ML) reaches an area under the receiver operating characteristic curve (AUROC) of 0.9126 on the integrated set and is statistically indistinguishable from the strongest available tool (Auto-Kla, DeLong

Indexed as

Computational BiologyLysineMachine LearningProtein Processing, Post-TranslationalProteinsDatabases, ProteinHumansPrediction AlgorithmsPredictive Learning ModelsLysineProteinsAlphaFoldcurated benchmark datasetleakage-controlled validationlysine lactylationmachine learningpost-translational modification predictionProteinBERTprotein language model

Identifiers

PMID42450039
PMCPMC13362394

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.