Evidence map›Paper›PMID 42443264›Full record

ArticleScientific reports2026

Gut microbiome signatures associate with DNA methylation-based biological aging.

Braden P Kunihiro, Brennan Y Yamamoto, Ruben Juarez, Alika K Maunakea

Abstract read
In one paragraph

Article in Scientific reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Braden P KunihiroDepartment of Anatomy, Biochemistry and Physiology, John A. Burns School of Medicine, Honolulu, HI, USA.
Brennan Y YamamotoDepartment of Anatomy, Biochemistry and Physiology, John A. Burns School of Medicine, Honolulu, HI, USA.
Ruben JuarezDepartment of Economics, University of Hawaii at Manoa, Honolulu, HI, USA.
Alika K MaunakeaDepartment of Anatomy, Biochemistry and Physiology, John A. Burns School of Medicine, Honolulu, HI, USA. amaunake@hawaii.edu.

Funding

Selenium Metabolism in the Heart: Impact of High Fructose and Low SeleniumP20GM139753 · NIGMS · UNIVERSITY OF HAWAII AT MANOA · PI Marla J Berry · 2022 to 2026
$13.3M
Socioecological Determinants of Immunoepigenetic Signatures of Diabetes Risk in Indigenous CommunitiesR01MD016593 · NIMHD · UNIVERSITY OF HAWAII AT MANOA · PI MAUNAKEA, ALIKA KEOLAOKALANI · 2021 to 2025
$3.3M
Immunoepigenetic-gut microbiome axis in the social networks of health disparate youthR56MD014630 · NIMHD · UNIVERSITY OF HAWAII AT MANOA · PI MAUNAKEA, ALIKA KEOLAOKALANI · 2019 to 2019
$386k
NIGMS NIH HHS P20 GM139753NIGMS NIH HHS P20GM139753NIMHD NIH HHS R01 MD016593NIMHD NIH HHS R01MD016593NIMHD NIH HHS R56 MD014630NIMHD NIH HHS R56MD014630
6 · The paper itself

Abstract

Recent advances in machine learning have applied novel tools to aging research, yet the relationship between the gut microbiome and epigenetic aging remains underexplored. This proof-of-concept study investigates whether gut microbial composition is associated with biological aging pace independent of chronological age. Using paired 16S rRNA gene sequencing and DNA methylation data from 123 monocyte-enriched samples in a cohort including Native Hawaiian and Pacific Islander participants, we developed "EpiBiome" models to predict epigenetic age acceleration residuals and DunedinPACE, a DNA methylation biomarker that estimates the instantaneous pace of biological aging. Models predicting residuals of traditional clocks (Horvath, Levine, GrimAge2) showed no predictive signal at either taxonomic rank. By contrast, the EpiBiome-Accel model for DunedinPACE reached statistical significance at both the species level (R

Indexed as

AgingDNA MethylationGastrointestinal MicrobiomeAgedEpigenesis, GeneticFemaleHumansMaleRNA, Ribosomal, 16SRNA, Ribosomal, 16S

Identifiers

PMID42443264
PMCPMC13365576

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.