Evidence map›Paper›PMID 42441094›Full record

ArticleJournal of veterinary research2026

Metagenomic analysis of the vaginal microbiota in cows with ovarian cysts.

Gamze Evkuran Dal, Baran Çelik, Ahmet Sabuncu, Merve Yılmaz, Ayşe Ilgın Kekeç, Emek Dümen, Serkan İkiz, Kadir Serdar Diker

Abstract read
In one paragraph

Article in Journal of veterinary research, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Gamze Evkuran DalDepartment of Obstetrics and Gynecology, Department of Food Hygiene and Technology, Faculty of Veterinary Medicine, Istanbul University-Cerrahpaşa, 34320 Avcilar, Türkiye.ORCID https://orcid.org/0000-0002-9996-3290
Baran ÇelikDepartment of Microbiology, Istanbul University-Cerrahpaşa, Faculty of Veterinary Medicine, 34500 Buyukcekmece, Türkiye.ORCID https://orcid.org/0000-0001-9122-0284
Ahmet SabuncuDepartment of Obstetrics and Gynecology, Department of Food Hygiene and Technology, Faculty of Veterinary Medicine, Istanbul University-Cerrahpaşa, 34320 Avcilar, Türkiye.ORCID https://orcid.org/0000-0002-9080-7056
Merve YılmazDepartment of Obstetrics and Gynecology, Department of Food Hygiene and Technology, Faculty of Veterinary Medicine, Istanbul University-Cerrahpaşa, 34320 Avcilar, Türkiye.ORCID https://orcid.org/0000-0002-6985-9150
Ayşe Ilgın KekeçDepartment of Microbiology, Istanbul University-Cerrahpaşa, Faculty of Veterinary Medicine, 34500 Buyukcekmece, Türkiye.ORCID https://orcid.org/0000-0002-0821-8376
Emek DümenDepartment of Food Hygiene and Technology, Faculty of Veterinary Medicine, Istanbul University-Cerrahpaşa, 34320 Avcilar, Türkiye.ORCID https://orcid.org/0000-0001-9389-9382
Serkan İkizDepartment of Microbiology, Istanbul University-Cerrahpaşa, Faculty of Veterinary Medicine, 34500 Buyukcekmece, Türkiye.ORCID https://orcid.org/0000-0001-6502-0780
Kadir Serdar DikerDepartment of Microbiology, Aydin Adnan Menderes University, Faculty of Veterinary Medicine, 09020 Aydın, Türkiye.ORCID https://orcid.org/0000-0003-2150-5553

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: This study compared the vaginal microbiota composition of dairy cows with follicular and luteal ovarian cysts using metagenomic analysis. Material and Methods: Ovarian cysts, which impair reproductive performance through endocrine disruption, were diagnosed by ultrasonography and serum hormone evaluation in Holstein cows 30-60 d postpartum. Forty-five cows were initially included and divided into follicular cyst, luteal cyst and control groups. Vaginal lavage samples were analysed using third-generation sequencing, and taxonomic classification was performed through 16S rRNA gene analysis. Results: A total of 258 operational taxonomic units (OTUs) were identified, with the highest diversity observed in the control group (mean of 56.8 OTUs) and the lowest in the luteal cyst group (mean of 49.0 OTUs). Proteobacteria was the dominant phylum across all groups (93.4%), followed by Tenericutes (5.9%). Firmicutes, Bacteroidetes and Fusobacteria accounted for less than 1%. At the family level, Burkholderiaceae (62.7%) and Pasteurellaceae (24.0%) were predominant, while of the genera, Conclusion: These results indicate that cystic cows exhibit reduced microbial diversity and altered bacterial composition in comparison with healthy animals. The predominance of Proteobacteria and

Indexed as

bovine ovarian cystsdairy cattlelong-read 16S rRNA sequencingpostpartum reproductive functionvaginal microbiome

Identifiers

PMID42441094
PMCPMC13334294

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.