Evidence map›Paper›PMID 42438340›Full record

ArticleProtein science : a publication of the Protein Society2026

Engineering the substrate scope of the thermostable phenolic acid decarboxylase N31 towards sterically hindered phenolic acids.

Kristin K F Bauer, Sonja Vaupel, Jacques Gay, Eva Vos, Aron Wanz, Daniel Kracher, Tobias Schöngassner, Lars-Erik Meyer, Shina C L Kamerlin, Selin Kara and 1 more

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Kristin K F BauerInstitute of Molecular Biotechnology, Graz University of Technology, Graz, Austria.
Sonja VaupelInstitute of Technical Chemistry, Leibniz University Hannover, Hannover, Germany.
Jacques GaySchool of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.ORCID 0009-0006-7769-4559
Eva VosSchool of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.
Aron WanzInstitute of Molecular Biotechnology, Graz University of Technology, Graz, Austria.
Daniel KracherInstitute of Molecular Biotechnology, Graz University of Technology, Graz, Austria.
Tobias SchöngassnerInstitute of Molecular Biotechnology, Graz University of Technology, Graz, Austria.
Lars-Erik MeyerInstitute of Technical Chemistry, Leibniz University Hannover, Hannover, Germany.
Shina C L KamerlinSchool of Chemistry and Biochemistry, Georgia Institute of Technology, Atlanta, Georgia, USA.
Selin KaraInstitute of Technical Chemistry, Leibniz University Hannover, Hannover, Germany.ORCID 0000-0001-6754-2814
Robert KouristInstitute of Molecular Biotechnology, Graz University of Technology, Graz, Austria.ORCID 0000-0002-2853-3525

Funding

Austrian Science Fund 10.55776/doc.46Austrian Science Fund 10.55776/P34280BioTechMed-GrazEuroHPC Joint UndertakingGeorgia Institute of TechnologyGeorgia Research AllianceNational Academic Infrastructure for Supercomputing in Sweden 2022-06725Niedersächsisches Ministerium für Wissenschaft und Kultur 12.5-76251-17-9/20U.S. Department of Education #P200A210014Vasser Woolley Foundation
6 · The paper itself

Abstract

Phenolic acid decarboxylases (PADs) convert bio-based hydroxycinnamic acids into valuable hydroxystyrene monomers under mild reaction conditions. These compounds are in high demand in polymer production, cosmetics, and flavoring. Especially 4-vinyl syringol, the decarboxylation product from sinapic acid, generates polymers with similar thermal stability and higher glass transition temperatures than vinyl guaiacol, the decarboxylation product from ferulic acid. However, natural PAD enzymes typically show slow turnover with sinapic acid. In addition, establishing a viable industrial process requires enzymes operating under elevated temperatures. To tackle these issues, we assessed five thermostable ancestral PADs towards their activity and stability for the conversion of ferulic acid and sinapic acid at different temperatures. A combinatorial active site library was prepared for the most thermostable ancestor. We expanded the substrate scope of a selected PAD ancestor to include sinapic acid through directed mutagenesis. A trade-off between ferulic-/caffeic acid and sinapic acid was observed and investigated via molecular dynamics simulations. The most stable ancestor was identified with a half-life of 3.65 days, analyzed at 50°C. We found the Ile29Ser-Leu80Ser-Ile93Ala triple mutation (SSA) to effectively expand the substrate scope with an 11-fold increase in catalytic efficiency for sinapic acid, and a half-life of 1.12 days at 50°C, being approximately 1.6-fold higher than the frequently used PAD from Bacillus subtilis.

Indexed as

Bacterial ProteinsCarboxy-LyasesCoumaric AcidsProtein EngineeringCatalytic DomainEnzyme StabilityHydroxybenzoatesSubstrate SpecificityTemperatureBacterial ProteinsCarboxy-LyasesCoumaric Acidsferulic acidHydroxybenzoatesphenolic acidphenolic acid decarboxylasesinapinic acidancestral sequence reconstructionbiobased polymersbiocatalysiscanololcombinatorial librarydirected enzyme evolutionenzymatic decarboxylationenzyme engineeringmolecular dynamics simulationsphenolic acid decarboxylaserenewable chemicals

Identifiers

PMID42438340
PMCPMC13358373

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.