Evidence map›Paper›PMID 42434259›Full record

ArticleJournal of gastrointestinal oncology2026

Mining and experimental validation of machine learning-based immune-related diagnostic biomarkers for hepatocellular carcinoma.

Wei Li, Hang Jiang, Jian Duan, Jinlan He, Liping Zhao, Guoping Zhong, Chenghu Fan

Abstract read
In one paragraph

Article in Journal of gastrointestinal oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Wei LiDepartment of Hepatobiliary Surgery, Third People's Hospital of Yunnan Province, Kunming, China.
Hang JiangDepartment of Hepatobiliary Surgery, Third People's Hospital of Yunnan Province, Kunming, China.ORCID https://orcid.org/0009-0009-8119-9309
Jian DuanThe First Affiliated Hospital of Kunming Medical University, Kunming, China.
Jinlan HeThe First Affiliated Hospital of Kunming Medical University, Kunming, China.
Liping ZhaoDepartment of Hepatobiliary Surgery, Third People's Hospital of Yunnan Province, Kunming, China.
Guoping ZhongDepartment of Hepatobiliary Surgery, Third People's Hospital of Yunnan Province, Kunming, China.
Chenghu FanDepartment of Hepatobiliary Surgery, Third People's Hospital of Yunnan Province, Kunming, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Hepatocellular carcinoma (HCC) is a highly malignant and aggressive tumor. Immune-related genes (IRGs) expression correlates closely with the HCC immune microenvironment, and this study aims to identify immune-related diagnostic markers in HCC. Methods: HCC-related datasets and IRGs were obtained from public databases (TCGA, ICGC, TISIDB, and InnateDB). Differential expression analysis screened differentially expressed genes (DEGs) between HCC and control samples, while weighted gene co-expression network analysis identified key module genes correlated with immune scoring systems. Candidate genes were obtained via the intersection of DEGs, IRGs, and key module genes. Hub genes were then determined through protein-protein interaction analysis, followed by correlation and survival analyses. Moreover, three machine learning algorithms identified diagnostic biomarkers, which were evaluated via a logit model and receiver operating characteristic curve analysis for HCC diagnostic efficacy. Finally, biomarker expression was validated in clinical samples. Results: After identifying 8,800 DEGs and 2,337 key module genes, we intersected them with IRGs to obtain 87 candidate genes. Thereafter, 33 hub genes were obtained. The hub genes showed a notable positive correlation, suggesting their potential involvement in regulating common biological processes. Additionally, six hub genes (e.g., Conclusions: This study identified three immune-related diagnostic biomarkers for HCC, which may provide novel insights into HCC prognostic management.

Indexed as

diagnostic biomarkersHepatocellular carcinoma (HCC)immunitymachine learning

Identifiers

PMID42434259
PMCPMC13350358

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.