Evidence map›Paper›PMID 42429102›Full record

ArticleGenetics in medicine : official journal of the American College of Medical Genetics2026

Uncovering phenotypic expansion in AXIN2-related disorders through precision animal modeling.

Nathalie M Aceves-Ewing, Denise G Lanza, Paul C Marcogliese, Di Lu, Chih-Wei Hsu, Hirokazu Hashimoto, Matthew Gonzalez, Audrey E Christiansen, Tara L Rasmussen, Alex J Ho and 27 more

Abstract read
In one paragraph

Article in Genetics in medicine : official journal of the American College of Medical Genetics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Uncovering phenotypic expansion in AXIN2-related disorders through precision animal modeling.Genetics in medicine : official journal of the American College of Medical Genetics · 2026
    Article
  2. Functional assays inGenome research · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

37 authors.

Nathalie M Aceves-EwingDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX.
Denise G LanzaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX.
Paul C MarcoglieseDepartment of Biochemistry and Medical Genetics, Rady Faculty of Health Sciences, University of Manitoba, Winnipeg, MB, Canada; Children's Hospital Research Institute of Manitoba, Winnipeg, MB, Canada.
Di LuDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX.
Chih-Wei HsuDepartment of Integrative Physiology, Baylor College of Medicine, Houston, TX; Optical Imaging and Vital Microscopy Core, Baylor College of Medicine, Houston, TX.
Hirokazu HashimotoDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX.
Matthew GonzalezDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX.
Audrey E ChristiansenDepartment of Integrative Physiology, Baylor College of Medicine, Houston, TX.
Tara L RasmussenDepartment of Integrative Physiology, Baylor College of Medicine, Houston, TX.
Alex J HoVerna and Marrs McLean Department of Biochemistry and Molecular Pharmacology, Baylor College of Medicine, Houston, TX; Advanced Technology Core for Macromolecular X-ray Crystallography, Baylor College of Medicine, Houston, TX.
Angelina GasperoDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX.
Cher ShaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX.
Mary E DickinsonDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Department of Integrative Physiology, Baylor College of Medicine, Houston, TX.
Bo YuanDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX.
Brian J ShayotaDivision of Medical Genetics, Department of Pediatrics, University of Utah, Salt Lake City, UT.
Stephanie PachterAtlantic Health System, Summit, NJ.
Xiaolin HuGeneDx, LLC, Gaithersburg, MD.
Debra Lynn Day-SalvatoreDepartment of Medical Genetics and Genomic Medicine, Saint Peter's University Hospital, New Brunswick, NJ.
Laura MackayDepartment of Pediatrics, Division of Genetics and Metabolism, University of Texas Southwestern Medical Center, Dallas, TX.
Oguz KancaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX.
Michael F WanglerDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX.
Lorraine PotockiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Texas Children's Hospital, Houston, TX.
Jill A RosenfeldDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX.
Richard Alan LewisDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Texas Children's Hospital, Houston, TX; Cullen Eye Institute, Department of Ophthalmology, Baylor College of Medicine, Houston, TX.
Hsiao-Tuan ChaoDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX; Texas Children's Hospital, Houston, TX; Department of Neuroscience, Baylor College of Medicine, Houston, TX; The Cain Pediatric Neurology Research Foundation Laboratories, Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX; McNair Medical Institute, The Robert and Janice McNair Foundation, Houston, TX; Division of Neurology and Developmental Neuroscience, Department of Pediatrics, Baylor College of Medicine, Houston, TX.
Brendan LeeDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Texas Children's Hospital, Houston, TX.
Lauren BliedenTexas Children's Hospital, Houston, TX; Cullen Eye Institute, Department of Ophthalmology, Baylor College of Medicine, Houston, TX.
Barry N WassermanDepartment of Pediatric Ophthalmology and Strabismus, Wills Eye Hospital, Sydney Kimmel College of Medicine, Thomas Jefferson University, Philadelphia, PA.
Dorine A BaxFaculty of Health, Science and Technology, Oxford Brookes University, Oxford, United Kingdom.
Nicola K RaggeFaculty of Health, Science and Technology, Oxford Brookes University, Oxford, United Kingdom; West Midlands Regional Clinical Genetics Service, Birmingham Women's and Children's NHS Foundation Trust and Birmingham Health Partners, Birmingham, United Kingdom.
Sukyeong LeeVerna and Marrs McLean Department of Biochemistry and Molecular Pharmacology, Baylor College of Medicine, Houston, TX; Advanced Technology Core for Macromolecular X-ray Crystallography, Baylor College of Medicine, Houston, TX.
Undiagnosed Diseases NetworkMember list in supplement.
Baylor College of Medicine Center for Precision Medicine ModelsMember list in supplement.
Shinya YamamotoDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX; Department of Neuroscience, Baylor College of Medicine, Houston, TX.
Hugo J BellenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX; Department of Neuroscience, Baylor College of Medicine, Houston, TX.
Lindsay C BurrageDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Texas Children's Hospital, Houston, TX. Electronic address: burrage@bcm.edu.
Jason D HeaneyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX. Electronic address: heaney@bcm.edu.

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Resource and Service SectionU54OD030165 · OD · BAYLOR COLLEGE OF MEDICINE · PI Lindsay C Burrage, Jason D. Heaney · 2020 to 2026
$16.6M
Pilot of New Technologies to Increase the Genomic Diagnosis of Undiagnosed Disease Network (UDN) PatientsU01HG007709 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI BACINO, CARLOS A., LEE, BRENDAN · 2014 to 2022
$14.3M
Clinical Sequencing Core Facility for the Undiagnosed Diseases Network (UDN)U01HG007942 · NHGRI · BAYLOR COLLEGE OF MEDICINE · PI ENG, CHRISTINE · 2014 to 2021
$10.2M
Preclinical and Clincial OutcomesP50HD103555 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI MIRJANA MALETIC-SAVATIC · 2020 to 2026
$9.9M
Zebrafish CoreU54NS093793 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2015 to 2022
$7.5M
Expansion and characterization of the Drosophila Toolkit to study SARS-CoV-2R24OD022005 · OD · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2016 to 2023
$7.4M
A Comprehensive Resource for Manipulating the Drosophila GenomeR24OD031447 · OD · BAYLOR COLLEGE OF MEDICINE · PI HUGO J BELLEN, Oguz Kanca · 2021 to 2026
$5.2M
Genetics & Genomics Training ProgramT32GM139534 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI GAD SHAULSKY · 2021 to 2026
$4.8M
Urine-Derived Cell RNA Sequencing to Improve Diagnosis in Undiagnosed UDN Participants.U01NS134348 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI Carlos A. Bacino, Brendan Lee · 2023 to 2026
$3.8M
SkyScan 1276: Multiscale Micro-CT SystemLaboratory S10OD030336 · OD · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MARRELLI, SEAN P · 2021 to 2021
$368k
Protein Crystallization ImagerS10OD030246 · OD · BAYLOR COLLEGE OF MEDICINE · PI LEE, SUKYEONG · 2021 to 2021
$136k
NCI NIH HHS P30 CA125123NHGRI NIH HHS U01 HG007709NHGRI NIH HHS U01 HG007942NICHD NIH HHS F31 HD115407NICHD NIH HHS P50 HD103555NIGMS NIH HHS T32 GM139534NIH HHS R24 OD022005NIH HHS R24 OD031447NIH HHS S10 OD030246NIH HHS S10 OD030336NIH HHS U54 OD030165NINDS NIH HHS U01 NS134348NINDS NIH HHS U54 NS093793Wellcome Trust
6 · The paper itself

Abstract

purposeHeterozygous pathogenic variants in AXIN2 (HGNC: 904) cause oligodontia-colorectal cancer syndrome. We identified 5 individuals with de novo heterozygous variants [NM_004655.4:c.196G>A p.(Glu66Lys), c.197A>G p.(Glu66Gly), and c.199G>A p.(Gly67Arg)] in AXIN2. Common phenotypes among these individuals included ectodermal dysplasia, global developmental delay, microcephaly, and limb, ophthalmologic, and genitourinary abnormalities.

methodsStructural modeling was performed to predict the impact of these variants on AXIN2. A prime editing N1 screen of mouse embryos was performed to test whether the p.Glu66Lys variant produces a phenotype. Drosophila models were used to test the effect of this variant on Wnt signaling.

resultsStructural modeling suggests that these variants disrupt AXIN2 binding to tankyrase, which regulates AXIN2 levels through poly-ADP-ribosylation. Heterozygous (p.Glu66Lys) mouse embryos were perinatally lethal with soft palate clefts and skeletal abnormalities. Modeling of the p.Glu66Lys variant in the Drosophila wing suggests gain-of-function or dominant-negative activity compared to reference AXIN2.

conclusionSpecific variants in the tankyrase-binding domain of AXIN2 are pathogenic, leading to phenotypic expansion with potential context-dependent effects on AXIN2 function and Wnt signaling. The N1 modeling strategy used to demonstrate variant pathogenicity may be beneficial for resolving other heterozygous variants associated with congenital anomalies.

Indexed as

Axin ProteinAnimalsDisease Models, AnimalDrosophilaEctodermal DysplasiaFemaleHeterozygoteHumansMaleMiceMutationPhenotypeTankyrasesWnt Signaling PathwayAXIN2 protein, humanAxin2 protein, mouseAxin ProteinTankyrasesAXIN2Ectodermal dysplasiaOligodontia-colorectal cancerTankyrase-binding domainWnt/β-catenin signaling

Identifiers

PMID42429102
PMCPMC13678866

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.