Evidence map›Paper›PMID 42428121›Full record

ArticlemedRxiv : the preprint server for health sciences2026

Adaptive multi-model ensembles for improved epidemic projections and decision support.

Stefania Fiandrino, Daniela Paolotti, Clara Bay, Matteo Chinazzi, Jessica T Davis, Samantha J Bents, Amanda C Perofsky, James Turtle, Pete Riley, Michal Ben-Nun and 35 more

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

45 authors.

Stefania FiandrinoDepartment of Computer, Control, and Management Engineering Antonio Ruberti, Sapienza, University of Rome, Via Ariosto, 25, Rome, Italy.ORCID 0000-0002-4513-3988
Daniela PaolottiISI Foundation, Turin, Italy.ORCID 0000-0003-1356-3470
Clara BayNortheastern University, Boston, Massachusetts.ORCID 0000-0002-4428-3001
Matteo ChinazziNortheastern University, Boston, Massachusetts.ORCID 0000-0002-5955-1929
Jessica T DavisNortheastern University, Boston, Massachusetts.ORCID 0000-0003-0726-1855
Samantha J BentsStanford University, Palo Alto, California.ORCID 0009-0003-9298-945X
Amanda C PerofskyNortheastern University, Boston, Massachusetts.ORCID 0000-0001-7341-9193
James TurtlePredictive Science Inc., San Diego, California.ORCID 0000-0003-0735-7769
Pete RileyPredictive Science Inc., San Diego, California.ORCID 0000-0002-1859-456X
Michal Ben-NunPredictive Science Inc., San Diego, California.ORCID 0000-0002-9164-0008
Sean M MooreUniversity of Notre Dame, Notre Dame, Indiana.ORCID 0000-0001-9062-6100
Alex PerkinsUniversity of Notre Dame, Notre Dame, Indiana.ORCID 0000-0002-7518-4014
Guido EspanaUniversity of Notre Dame, Notre Dame, Indiana.ORCID 0000-0002-9915-8056
Ajitesh SrivastavaUniversity of Southern California, Los Angeles, California.ORCID 0000-0002-8706-5717
Majd Al AawarUniversity of Southern California, Los Angeles, California.
Shraddha Ramdas BandekarUniversity of Texas at Austin, Austin, Texas.ORCID 0000-0001-5063-2290
Kaiming BiThe University of Texas Health Science Center at Houston, Houston, Texas.ORCID 0000-0001-6234-6232
Anass BouchnitaUniversity of Texas at El Paso, El Paso, Texas.ORCID 0000-0002-2729-6484
Spencer J FoxNorthern Arizona University, Flagstaff, Arizona.ORCID 0000-0003-1969-3778
Lauren Ancel MeyersUniversity of Texas at Austin, Austin, Texas.ORCID 0000-0002-5828-8874
Srinivasan VenkatramananUniversity of Virginia, Charlottesville, Virginia.ORCID 0000-0002-0874-8692
Przemyslaw PorebskiNorthern Arizona University, Flagstaff, Arizona.ORCID 0000-0001-8012-5791
Aniruddha AdigaNorthern Arizona University, Flagstaff, Arizona.ORCID 0000-0002-5396-1978
Bryan LewisNorthern Arizona University, Flagstaff, Arizona.ORCID 0000-0003-0793-6082
Madhav MaratheNorthern Arizona University, Flagstaff, Arizona.ORCID 0000-0003-1653-0658
Fardad HaghpanahCenter for Disease Dynamics, Economics & Policy, Washington, DC.ORCID 0000-0002-2158-8486
Eili KleinCenter for Disease Dynamics, Economics & Policy, Washington, DC.ORCID 0000-0002-1304-5289
Sara L LooJohns Hopkins University, Baltimore, Maryland.ORCID 0000-0001-9763-5587
Sung-Mok JungUniversity of North Carolina at Chapel Hill, Chapel Hill, North Carolina.ORCID 0000-0002-0787-4515
Claire P SmithUniversity of North Carolina at Chapel Hill, Chapel Hill, North Carolina.ORCID 0000-0003-1069-9460
Lucie ContaminUniversity of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0001-5797-1279
Harry HochheiserUniversity of Pittsburgh, Pittsburgh, Pennsylvania.ORCID 0000-0001-8793-9982
Erica C CarcelénJohns Hopkins University, Baltimore, Maryland.
Emily HowertonThe Pennsylvania State University, University Park, Pennsylvania.ORCID 0000-0002-0639-3728
Katriona SheaThe Pennsylvania State University, University Park, Pennsylvania.ORCID 0000-0002-7607-8248
Katie YanThe Pennsylvania State University, University Park, Pennsylvania.ORCID 0000-0002-8381-504X
Michael C RungeU.S. Geological Survey, Laurel, Maryland.ORCID 0000-0002-8081-536X
Cecile ViboudFogarty International Center, National Institutes of Health, Bethesda, Maryland.ORCID 0000-0003-3243-4711
Carl A B PearsonUniversity of North Carolina at Chapel Hill, Chapel Hill, North Carolina.ORCID 0000-0003-0701-7860
Shaun TrueloveJohns Hopkins University, Baltimore, Maryland.ORCID 0000-0003-0538-0607
Justin LesslerDepartment of Epidemiology University of North Carolina at Chapel Hill; Carolina Population Center; Johns Hopkins.ORCID 0000-0002-9741-8109
Rebecca K BorcheringCenters for Disease Control and Prevention, Atlanta, Georgia.ORCID 0000-0003-4309-2913
Matthew BiggerstaffCenters for Disease Control and Prevention, Atlanta, Georgia.ORCID 0000-0001-5108-8311
Nicolò GozziISI Foundation, Turin, Italy.ORCID 0000-0002-9996-3194
Alessandro VespignaniNortheastern University, Boston, Massachusetts.ORCID 0000-0003-3419-4205

Funding

WORK ORDER 126643 B539 EXPAND IC SUITE75N91019D00024 · NIAID · LEIDOS BIOMEDICAL RESEARCH, INC. · PI BRISCOE, LYNN · 2019 to 2025
$3932.6M
MIDAS Coordination Center - Year 6-10R24GM153920 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HARRY S HOCHHEISER · 2024 to 2026
$4.3M
Model-based inference and forecasting of co-circulating pathogen dynamicsR35GM143029 · NIGMS · UNIVERSITY OF NOTRE DAME · PI PERKINS, ALEX · 2021 to 2025
$2.0M
Merging machine learning and mechanistic models to improve prediction and inference in emerging epidemicsR01GM140564 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI EDWARDS, JESSIE, LESSLER, JUSTIN · 2021 to 2024
$1.8M
Assessing the impact of COVID-19 interventions on human mobility and SARS-CoV-2 transmission dynamics in the United StatesR21AI164391 · NIAID · UNIVERSITY OF NOTRE DAME · PI MOORE, SEAN MICHAEL · 2021 to 2022
$430k
NCIRD CDC HHS U01 IP001136NCIRD CDC HHS U01 IP001137NIAID NIH HHS R21 AI164391NIGMS NIH HHS R01 GM140564NIGMS NIH HHS R24 GM153920NIGMS NIH HHS R35 GM143029NIH HHS 75N91019D00024
6 · The paper itself

Abstract

In recent years, the use of multi-model ensemble projections in infectious disease modeling has become an established methodological approach to account for and integrate across uncertainties and structural differences present in individual models. However, the creation of long-term ensemble projections through these coordinated efforts is resource-intensive, demanding the input of multiple research teams and substantial computational power. This typically limits the ability to refine projections, update the selection of plausible epidemic trajectories, or expand the number of scenarios that can be assessed, even as new empirical data become available. To address this challenge, we define an adaptive ensemble approach that, analogously to a multi-model particle filtering method, dynamically selects individual model trajectories based on observed data throughout the epidemic projection period. We demonstrate the effectiveness of this methodology using the U.S. Flu Scenario Modeling Hub (SMH) projections for influenza hospitalizations in the United States during the 2023-2024 and 2024-2025 winter seasons. Our findings show that the adaptive ensemble yields improved predictive accuracy with respect to the original SMH ensemble projections across several scoring rules and geographical resolutions. Furthermore, the adaptive ensemble approach offers two additional applications: i) the dynamic assignment of posterior probabilities to epidemic scenarios, identifying the most plausible scenario, and representing how reality is captured by a combination of scenarios, and ii) the potential use for short-term forecasting. The adaptive ensemble approach is able to identify the most likely scenarios for the 2023-2024 and 2024-2025 U.S. influenza seasons, even in the early stages of the epidemic. It outperforms, retrospectively, a baseline model in short-term forecasting of influenza hospitalizations in the United States during the two seasons across various horizons and scoring rules, showing potential to contribute to real-time collaborative forecasting challenges such as CDC's FluSight. The proposed approach offers an efficient or low-resource strategy to increase the impact of multi-model epidemic projections by providing real-time support to modeling teams, public health authorities, and decision-makers.

Identifiers

PMID42428121
PMCPMC13345484

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.