Evidence map›Paper›PMID 42427792›Full record

ArticlebioRxiv : the preprint server for biology2026

Ultramutagenesis through combined Msh2 depletion and proofreading-deficient DNA polymerase ε expression enhances small molecule target identification in forward genetic screens.

Alexander-Hoi Nguyen, Vicky Li, Wei-Min Chen, Jacob Kimberg, Anthony J Davis, David G McFadden, Juan Manuel Povedano

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Alexander-Hoi NguyenDepartment of Internal Medicine, Division of Endocrinology, UT Southwestern Medical Center, Dallas, Texas.
Vicky LiDepartment of Internal Medicine, Division of Endocrinology, UT Southwestern Medical Center, Dallas, Texas.ORCID 0000-0003-3113-8910
Wei-Min ChenDepartment of Radiation Oncology, Section of Molecular Medicine, UT Southwestern Medical Center, Dallas, Texas.ORCID 0000-0002-5247-7826
Jacob KimbergDepartment of Internal Medicine, Division of Endocrinology, UT Southwestern Medical Center, Dallas, Texas.
Anthony J DavisDepartment of Radiation Oncology, Section of Molecular Medicine, UT Southwestern Medical Center, Dallas, Texas.ORCID 0000-0003-0184-3651
David G McFaddenDepartment of Internal Medicine, Division of Endocrinology, UT Southwestern Medical Center, Dallas, Texas.ORCID 0000-0001-8466-2199
Juan Manuel PovedanoDepartment of Internal Medicine, Division of Endocrinology, UT Southwestern Medical Center, Dallas, Texas.ORCID 0000-0002-8384-6540

Funding

Targeting EWSR1-FLI1 through Functional, Structural and Chemical ApproachesU54CA231649 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI NIJHAWAN, DEEPAK · 2019 to 2019
$10.0M
Targeting transcriptional addiction in fusion-driven sarcomaUM1CA294119 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI David Glenn McFadden, Joseph M Ready · 2024 to 2026
$6.9M
Development of a RUVBL1/2 Inhibitor as a Radiosensitizer and Immune Stimulator for NSCLCR01CA276058 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI Esra Akbay, Anthony J Davis · 2023 to 2026
$2.2M
Mechanisms of Motor SuperperformanceR01NS133439 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI Juan M. Pascual · 2024 to 2026
$1.7M
NCI NIH HHS R01 CA276058NCI NIH HHS U54 CA231649NCI NIH HHS UM1 CA294119NINDS NIH HHS R01 NS133439
6 · The paper itself

Abstract

DNA mismatch repair (MMR) deficiency has been widely utilized in forward genetic screens to identify drug resistance mutations and elucidate the mechanisms of action of cytotoxic small molecules. However, MMR deficiency generates a characteristic mutational signature enriched for C>T transitions that precludes saturation of mutagenesis. We hypothesized that expression of proofreading deficient DNA polymerase epsilon, as has been observed in patients with biallelic MMR deficiency, would enhance mutagenesis and enable identification of new resistance mutations and cytotoxin mechanisms. Here, we combine auxin-inducible degradation of Msh2 with doxycycline-inducible expression of the proofreading-deficient Polε

Identifiers

PMID42427792
PMCPMC13345076

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.